ggKbase home page

L2_037_000M1_scaffold_714_6

Organism: dasL2_037_000M1_concoct_51_fa

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 4016..4528

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Clostridium sp. CAG:299 RepID=R7AD44_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 170.0
  • Bit_score: 334
  • Evalue 3.70e-89
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 170.0
  • Bit_score: 334
  • Evalue 5.20e-89
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 169.0
  • Bit_score: 223
  • Evalue 3.40e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:299 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 513
ATGGAACAGTTTTTACGGGTGGGCGTCATTACCTCTCCTCACGGCATCCGCGGCGAGGTAAAGGTGTTCCCTACAACCGACGATATCAACCGCTTTAAGAAACTGAAGGAAGTATATCTGGACACCGGAAAAGAACGCCTTTCTCTCCACGTGGAGCAGGCGAAATTTTTCAAGGGCATGGCGATTTTAAAATTCAGGGAATTTAACAGCATCAATGAGGTGGAGCCATTCCGCAAAAAAGATCTTCTCGTATCCAGAGAGCATGCGGTTCAGTTAGCGCCCAATGAAAACTTTATCGTAGATCTCATCGGCCTTGCTGTGGTGACTGACGAGGGAGAGGAGTTCGGAACGGTAAAGGATATTCTTCAGACAGGCGCCAACGACGTCTATGTGATTACGGGAAAGGATGGAAAGGAATATCTGTTCCCATCTATCAAGGAGTGCATTCTTGACGTGGATCTGGACAAAGGACAGGTTCTGGTACATATTTTAGACGGCCTTCTGGATCTGTAA
PROTEIN sequence
Length: 171
MEQFLRVGVITSPHGIRGEVKVFPTTDDINRFKKLKEVYLDTGKERLSLHVEQAKFFKGMAILKFREFNSINEVEPFRKKDLLVSREHAVQLAPNENFIVDLIGLAVVTDEGEEFGTVKDILQTGANDVYVITGKDGKEYLFPSIKECILDVDLDKGQVLVHILDGLLDL*