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L2_037_000M1_scaffold_1277_1

Organism: dasL2_037_000M1_concoct_51_fa

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(3..518)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZSY0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 172.0
  • Bit_score: 329
  • Evalue 1.20e-87
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 172.0
  • Bit_score: 329
  • Evalue 1.70e-87
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 174.0
  • Bit_score: 256
  • Evalue 4.80e-66

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Taxonomy

Clostridium sp. CAG:299 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 516
GTGGAGAAAGAGAGAGACAATTTTTTAGAAAAATTAAAAAAACTTGTCGATCTGGCAAAAACAAAGCAGAACGCTCTGGATATTACAGAGATTAATGATTTTTTTGCCGCCGACAACCTGTCACCGGAACAGATGGAGCAGATCTATAACTATCTGGAACAGAATAATATTGATGTGATTCCGGAAGTGATTGATGAGACTGCACTCAACGATGATCTGCTGATGCTCGATGATGTGGACGACGACTTTATGAAAAACGGGGAAGAGGAGGACATTGATCTGGACGCCATTGACCTTCTGGAGGGAATTGGCACAGAGGATCCGGTCCGCATGTACCTGAAGGAGATTGGTACAGTTCCGCTTCTCAGCGCTGAGGAAGAGCTGCGCCTTGCCAAAAGAAAGGCAGAGGGCGACATGTCTGCGAAGGAACGCTTAATTGAGGCCAATTTAAGGCTTGTGGTAAGTATTGCGAAGCGTTATACCGGAAGAGGCATGAGCTTTCTGGATCTGGTTCAG
PROTEIN sequence
Length: 172
VEKERDNFLEKLKKLVDLAKTKQNALDITEINDFFAADNLSPEQMEQIYNYLEQNNIDVIPEVIDETALNDDLLMLDDVDDDFMKNGEEEDIDLDAIDLLEGIGTEDPVRMYLKEIGTVPLLSAEEELRLAKRKAEGDMSAKERLIEANLRLVVSIAKRYTGRGMSFLDLVQ