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L2_037_000M1_scaffold_1277

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1277_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..518)
DNA (516bp) protein (172aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZSY0_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L2_037_000M1_scaffold_1277_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(849..1739)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7A5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44203.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L2_037_000M1_scaffold_1277_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1790..2929)
DNA (1140bp) protein (380aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Clostridium sp. CAG:299 RepID=R7ANM4_9CLOT
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CDD44202.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_1277_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2998..3978)
DNA (981bp) protein (327aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
BirA biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZSX4_9CLOT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_1277_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3986..4297)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZDG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44200.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1277_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4459..5391)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZLE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44199.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Membrane protease subunits, stomatin/prohibitin homologs
L2_037_000M1_scaffold_1277_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5393..5830)
DNA (438bp) protein (146aa)
Nodulation efficiency protein D n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7A2_9CLOT
Nodulation efficiency protein D {ECO:0000313|EMBL:CDD44198.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Membrane protein implicated in regulation of membrane protease activity
L2_037_000M1_scaffold_1277_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5930..6715)
DNA (786bp) protein (262aa)
rRNA methylases n=1 Tax=Clostridium sp. CAG:299 RepID=R7ANM0_9CLOT
rRNA methylases {ECO:0000313|EMBL:CDD44197.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
rRNA methylases
L2_037_000M1_scaffold_1277_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6712..8649)
DNA (1938bp) protein (646aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZSW9_9CLOT
NAD+ synthase {ECO:0000313|EMBL:CDD44196.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_1277_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8734..9549)
DNA (816bp) protein (272aa)
ThiF family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZDG0_9CLOT
ThiF family protein {ECO:0000313|EMBL:CDD44195.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L2_037_000M1_scaffold_1277_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9875..11302
DNA (1428bp) protein (476aa)
Bacillus/Clostridium GerA spore germination protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZLD8_9CLOT
Bacillus/Clostridium GerA spore germination protein {ECO:0000313|EMBL:CDD44194.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Bacillus/Clostridium GerA spore germination protein.
L2_037_000M1_scaffold_1277_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11310..12725)
DNA (1416bp) protein (472aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridium RepID=D6DHW0_CLOSC
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBK77284.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_000M1_scaffold_1277_13
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12818..13681)
DNA (864bp) protein (288aa)
Uncharacterized conserved protein n=2 Tax=Clostridium RepID=D6DHV3_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE14515.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_037_000M1_scaffold_1277_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13790..15244)
DNA (1455bp) protein (485aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z785_9CLOT
L2_037_000M1_scaffold_1277_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15417..16112)
DNA (696bp) protein (232aa)
Putative sortase SrtB family n=1 Tax=Clostridium sp. CAG:299 RepID=R7ANK2_9CLOT
Putative sortase SrtB family {ECO:0000313|EMBL:CDD44177.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1277_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16123..21354)
DNA (5232bp) protein (1744aa)
Cna protein B-type domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZSU7_9CLOT
Cna protein B-type domain protein {ECO:0000313|EMBL:CDD44176.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
LPXTG-motif cell wall anchor domain-containing protein
Displaying 16 items

View Taxonomy