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L2_037_000M1_scaffold_1201

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1201_1
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(185..1675)
DNA (1491bp) protein (497aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PVK3_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC27560.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_037_000M1_scaffold_1201_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1749..3821
DNA (2073bp) protein (691aa)
Putative peptidoglycan binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJP5_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EFB76993.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Putative peptidoglycan-binding domain-containing protein
L2_037_000M1_scaffold_1201_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3825..4514
DNA (690bp) protein (230aa)
Putative peptidoglycan binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJP4_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EFB76992.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Putative peptidoglycan-binding domain-containing protein
L2_037_000M1_scaffold_1201_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4709..5284
DNA (576bp) protein (192aa)
Nitroreductase family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJP3_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:EFB76991.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Nitroreductase
L2_037_000M1_scaffold_1201_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5361..6929)
DNA (1569bp) protein (523aa)
Alpha amylase, catalytic domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJP2_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EFB76990.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
amy13G; alpha-amylase
L2_037_000M1_scaffold_1201_6
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7309..9039
DNA (1731bp) protein (577aa)
Carbon starvation protein CstA n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PTC8_9FIRM
Carbon starvation protein CstA {ECO:0000313|EMBL:CDC27668.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Carbon starvation protein, predicted membrane protein
L2_037_000M1_scaffold_1201_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9218..10141
DNA (924bp) protein (308aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJP0_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EFB76988.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
family 3 extracellular solute-binding protein
L2_037_000M1_scaffold_1201_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10222..11046
DNA (825bp) protein (275aa)
ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFB76987.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
polar amino acid ABC transporter inner membrane subunit
L2_037_000M1_scaffold_1201_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11039..11779
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB76986.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC transporter
L2_037_000M1_scaffold_1201_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12033..15521)
DNA (3489bp) protein (1163aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Putative ATP-dependent nuclease subunit A n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS3_9FIRM
recombination helicase AddA
L2_037_000M1_scaffold_1201_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15696..19016)
DNA (3321bp) protein (1107aa)
Putative ATP-dependent nuclease subunit B n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS4_9FIRM
Putative ATP-dependent nuclease subunit B {ECO:0000313|EMBL:EFB76372.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATP-dependent nuclease, subunit B
L2_037_000M1_scaffold_1201_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19176..19826)
DNA (651bp) protein (217aa)
Putative stage II sporulation protein R n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS5_9FIRM
Putative stage II sporulation protein R {ECO:0000313|EMBL:EFB76373.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative stage II sporulation protein R
L2_037_000M1_scaffold_1201_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19880..20776)
DNA (897bp) protein (299aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS6_9FIRM
L2_037_000M1_scaffold_1201_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20794..21972)
DNA (1179bp) protein (393aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFB76375.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFB76375.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Aminotransferase, class I/II n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLS7_9FIRM
Aspartate/tyrosine/aromatic aminotransferase
L2_037_000M1_scaffold_1201_15

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comp(21972..22148)
DNA (177bp) protein (59aa)
Lrp/AsnC family transcriptional regulator (Fragment) n=1 Tax=human gut metagenome RepID=K1S4V2_9ZZZZ
Lrp/AsnC family transcriptional regulator {ECO:0000313|EMBL:EKC48775.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Transcriptional regulators
Displaying 15 items

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