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L2_037_000M1_scaffold_1548

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1548_1
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2..73)
DNA (72bp) protein (24aa)
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L-fucose isomerase n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LLA2_TREBD
L2_037_000M1_scaffold_1548_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(90..1538)
DNA (1449bp) protein (483aa)
Rhamnulokinase (EC:2.7.1.5)
Rhamnulokinase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y927_9FIRM
Rhamnulokinase {ECO:0000313|EMBL:CDD30420.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L2_037_000M1_scaffold_1548_3
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1535..1969)
DNA (435bp) protein (145aa)
Fucose dissimilation pathway protein FucU (EC:5.1.3.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A403_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37830.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L2_037_000M1_scaffold_1548_4
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(1981..2688)
DNA (708bp) protein (236aa)
L-fuculose-phosphate aldolase (EC:4.1.2.17)
L-fuculose-phosphate aldolase {ECO:0000313|EMBL:AEE15582.1}; EC=4.1.2.17 {ECO:0000313|EMBL:AEE15582.1};; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L-fuculose-phosphate aldolase n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LLA4_TREBD
L2_037_000M1_scaffold_1548_5
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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2810..3664
DNA (855bp) protein (285aa)
Transcriptional regulator with cupin sensor AraC family n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y327_9FIRM
Transcriptional regulator with cupin sensor AraC family {ECO:0000313|EMBL:CDD30423.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
AraC family transcriptional regulator
L2_037_000M1_scaffold_1548_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3912..4997)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77440.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Phosphotransferase enzyme family.
L2_037_000M1_scaffold_1548_7
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5025..5591)
DNA (567bp) protein (189aa)
Chromate transporter n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7A9_EUBE2
chromate transporter
Chromate transporter {ECO:0000313|EMBL:ACR73187.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_037_000M1_scaffold_1548_8
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5588..6154)
DNA (567bp) protein (189aa)
Chromate transporter n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7B0_EUBE2
chromate transporter
Chromate transporter {ECO:0000313|EMBL:ACR73188.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_037_000M1_scaffold_1548_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6173..7294)
DNA (1122bp) protein (374aa)
Anaerobic sulfatase maturase {ECO:0000313|EMBL:EFB77582.1}; EC=1.1.99.- {ECO:0000313|EMBL:EFB77582.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Anaerobic sulfatase maturase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIB4_9FIRM
Arylsulfatase regulator (Fe-S oxidoreductase)
L2_037_000M1_scaffold_1548_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7291..8724)
DNA (1434bp) protein (478aa)
Arylsulfatase {ECO:0000313|EMBL:EFC98639.1}; EC=3.1.6.- {ECO:0000313|EMBL:EFC98639.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Arylsulfatase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHQ3_9CLOT
sulfatase
L2_037_000M1_scaffold_1548_11
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8799..10211)
DNA (1413bp) protein (471aa)
Alpha-L-fucosidase {ECO:0000313|EMBL:EJW17744.1}; EC=3.2.1.51 {ECO:0000313|EMBL:EJW17744.1};; TaxID=1206781 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei DSM 29.;"
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Paenibacillus alvei DSM 29 RepID=K4ZFC8_PAEAL
L2_037_000M1_scaffold_1548_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10216..12384)
DNA (2169bp) protein (723aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase {ECO:0000313|EMBL:EFB77441.1}; EC=2.4.1.211 {ECO:0000313|EMBL:EFB77441.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIT2_9FIRM
conserved hypothetical protein TIGR02336
L2_037_000M1_scaffold_1548_13
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12381..14546)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WYW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA05229.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L2_037_000M1_scaffold_1548_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14576..15430)
DNA (855bp) protein (285aa)
ABC transporter, permease protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FT25_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEG94254.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC transporter
L2_037_000M1_scaffold_1548_15
Paenibacillus odorifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15432..16346)
DNA (915bp) protein (305aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Blautia sp. CAG:237 RepID=R6LUN8_9FIRM
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIQ75744.1}; TaxID=189426 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus odorifer.;"
L2_037_000M1_scaffold_1548_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16444..17847)
DNA (1404bp) protein (468aa)
Carbohydrate ABC transporter, carbohydrate-binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FT28_9FIRM
Carbohydrate ABC transporter, carbohydrate-binding protein {ECO:0000313|EMBL:EEG94257.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ABC transporter substrate-binding protein
L2_037_000M1_scaffold_1548_17

Not on your lists

18061..18342
DNA (282bp) protein (94aa)
Sensor with HAMP domain protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U1R7_9ZZZZ
Sensor with HAMP domain protein {ECO:0000313|EMBL:EKC65431.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying 17 items

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