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L2_037_000M1_scaffold_1704

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1704_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..891)
DNA (891bp) protein (297aa)
Transporter, YbiR family n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8F5_9FIRM
transporter, YbiR family
Transporter, YbiR family {ECO:0000313|EMBL:CBL01118.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_037_000M1_scaffold_1704_2
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(919..1488)
DNA (570bp) protein (190aa)
Peptidase S54 family n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q0E2_9FIRM
Peptidase S54 family {ECO:0000313|EMBL:CDC30163.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_037_000M1_scaffold_1704_3
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1845..2075
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q2Q8_9FIRM
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_037_000M1_scaffold_1704_4
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2089..2973
DNA (885bp) protein (295aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
acetyl-CoA carboxylase, carboxyl transferase, beta subunit (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q039_9FIRM
L2_037_000M1_scaffold_1704_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2970..3929
DNA (960bp) protein (320aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZM5_9FIRM
L2_037_000M1_scaffold_1704_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3926..4879
DNA (954bp) protein (318aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41 2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SE19_9FIRM
L2_037_000M1_scaffold_1704_7

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4876..5505
DNA (630bp) protein (210aa)
Dioxygenases related to 2-nitropropane dioxygenase (EC:1.3.1.-)
Enoyl-[acyl-carrier-protein] reductase (NADH) (Fragment) n=1 Tax=human gut metagenome RepID=K1TYT7_9ZZZZ
Enoyl-[acyl-carrier-protein] reductase (NADH) {ECO:0000313|EMBL:EKC75038.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_037_000M1_scaffold_1704_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5530..5817
DNA (288bp) protein (96aa)
Dioxygenases related to 2-nitropropane dioxygenase (EC:1.3.1.-)
Dioxygenases related to 2-nitropropane dioxygenase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q036_9FIRM
Putative enoyl-[acyl-carrier-protein] reductase II {ECO:0000313|EMBL:EFB75844.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_000M1_scaffold_1704_9

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5814..6752
DNA (939bp) protein (313aa)
[Acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=human gut metagenome RepID=K1UAR1_9ZZZZ
Malonyl CoA-acyl carrier protein transacylase {ECO:0000313|EMBL:EKC77089.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_037_000M1_scaffold_1704_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6755..7507
DNA (753bp) protein (251aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:EFB75842.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EFB75842.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ7_9FIRM
L2_037_000M1_scaffold_1704_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7516..8766
DNA (1251bp) protein (417aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.179 2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMQ6_9FIRM
L2_037_000M1_scaffold_1704_12

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8769..9227
DNA (459bp) protein (153aa)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ {ECO:0000313|EMBL:EKC51010.1}; EC=4.2.1.- {ECO:0000313|EMBL:EKC51010.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC:4.2.1.-)
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ n=1 Tax=human gut metagenome RepID=K1SBA0_9ZZZZ
L2_037_000M1_scaffold_1704_13

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9292..9735
DNA (444bp) protein (148aa)
Transcriptional regulator, MarR family (Fragment) n=1 Tax=human gut metagenome RepID=K1UIU1_9ZZZZ
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EKC79949.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Transcriptional regulators
L2_037_000M1_scaffold_1704_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10183..11082)
DNA (900bp) protein (300aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9WBS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ06500.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
AraC family transcriptional regulator
L2_037_000M1_scaffold_1704_15
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11316..13841
DNA (2526bp) protein (842aa)
Alpha-glucosidase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYK6_ROSHA
alpha-glucosidase
Alpha-glucosidase {ECO:0000313|EMBL:AEN98103.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_037_000M1_scaffold_1704_16
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14022..15059
DNA (1038bp) protein (346aa)
TRAP transporter solute receptor, DctP family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LHD2_9FIRM
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:EET59919.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
TRAP dicarboxylate transporter subunit DctP
L2_037_000M1_scaffold_1704_17

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15063..15572
DNA (510bp) protein (170aa)
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=human gut metagenome RepID=K1RPL9_9ZZZZ
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:EKC47328.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
TRAP dicarboxylate transporter subunit DctQ
L2_037_000M1_scaffold_1704_18
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15569..16843
DNA (1275bp) protein (425aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYK3_ROSHA
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:AEN98100.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Displaying 18 items

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