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L2_037_000M1_scaffold_1914

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1914_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..151
DNA (150bp) protein (50aa)
Sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KCM3_9FIRM
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
Sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2) {ECO:0000313|EMBL:CBL02586.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_037_000M1_scaffold_1914_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(354..1562)
DNA (1209bp) protein (403aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Putative carboxynorspermidine decarboxylase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD3_9FIRM
Putative carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EFB74418.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_000M1_scaffold_1914_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1562..2821)
DNA (1260bp) protein (420aa)
Saccharopine dehydrogenase {ECO:0000313|EMBL:EFB74417.1}; EC=1.5.1.7 {ECO:0000313|EMBL:EFB74417.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carboxynorspermidine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD2_9FIRM
L2_037_000M1_scaffold_1914_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3040..3897)
DNA (858bp) protein (286aa)
Agmatinase {ECO:0000313|EMBL:EFB74416.1}; EC=3.5.3.11 {ECO:0000313|EMBL:EFB74416.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD1_9FIRM
L2_037_000M1_scaffold_1914_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3897..4754)
DNA (858bp) protein (286aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSD0_9FIRM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_000M1_scaffold_1914_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4770..6236)
DNA (1467bp) protein (489aa)
arginine decarboxylase (EC:4.1.1.19)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSC9_9FIRM
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFB74414.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_000M1_scaffold_1914_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6971..8338
DNA (1368bp) protein (456aa)
ABC transporter, solute-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSH7_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFB74357.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_037_000M1_scaffold_1914_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8468..9319
DNA (852bp) protein (284aa)
ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSH8_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFB74358.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_037_000M1_scaffold_1914_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9319..10167
DNA (849bp) protein (283aa)
ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSH9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFB74359.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_037_000M1_scaffold_1914_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10201..11205
DNA (1005bp) protein (335aa)
Transcriptional regulator, LacI family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSI0_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFB74360.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
PurR; transcriptional regulator
L2_037_000M1_scaffold_1914_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11255..12736
DNA (1482bp) protein (494aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSI1_9FIRM
L2_037_000M1_scaffold_1914_12
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12935..13690)
DNA (756bp) protein (252aa)
LamB/YcsF family protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RXZ5_9ZZZZ
UPF0271 protein K413DRAFT_2380 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
LamB/YcsF family protein
L2_037_000M1_scaffold_1914_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13704..14495)
DNA (792bp) protein (264aa)
UPF0317 protein BN785_01390 n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CL16_9FIRM
UPF0317 protein K413DRAFT_2379 {ECO:0000256|HAMAP-Rule:MF_01830}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L2_037_000M1_scaffold_1914_14
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14511..15155)
DNA (645bp) protein (215aa)
Biotin-dependent carboxylase domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5C7_9CLOT
Biotin-dependent carboxylase-like protein {ECO:0000313|EMBL:EXG85588.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
urea amidolyase-like protein
L2_037_000M1_scaffold_1914_15
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(15101..15487)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037A4941
Urea amidolyase-like protein {ECO:0000313|EMBL:ETT42845.1}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
urea amidolyase-like protein
L2_037_000M1_scaffold_1914_16

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comp(15484..16176)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1S3S3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC50029.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying 16 items

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