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L2_037_000M1_scaffold_3187

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_3187_1
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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221..1294
DNA (1074bp) protein (358aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium sp. CAG:242 RepID=R6DLV1_9CLOT
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDA78857.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_037_000M1_scaffold_3187_2
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1401..2909
DNA (1509bp) protein (503aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M312_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65350.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L2_037_000M1_scaffold_3187_3
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2924..3907
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L1K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49637.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
inner-membrane translocator
L2_037_000M1_scaffold_3187_4
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3911..4111
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D0X6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78854.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L2_037_000M1_scaffold_3187_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4266..4844)
DNA (579bp) protein (193aa)
Flavin reductase-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLX9_9FIRM
Flavin reductase-like protein {ECO:0000313|EMBL:EFB76427.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L2_037_000M1_scaffold_3187_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4841..5827)
DNA (987bp) protein (329aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB76426.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76426.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLX8_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L2_037_000M1_scaffold_3187_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5846..6544)
DNA (699bp) protein (233aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLX7_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EFB76425.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L2_037_000M1_scaffold_3187_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6655..7713
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76424.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_037_000M1_scaffold_3187_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7853..8545
DNA (693bp) protein (231aa)
ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLX5_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFB76423.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_037_000M1_scaffold_3187_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8542..9105
DNA (564bp) protein (188aa)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLX4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB76422.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
Displaying 10 items

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