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L2_037_000M1_scaffold_3270

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_3270_1

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105..605
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZEA1_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61655.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L2_037_000M1_scaffold_3270_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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628..1761
DNA (1134bp) protein (378aa)
Exonuclease SbcCD, D subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQD5_9FIRM
Exonuclease SbcCD, D subunit {ECO:0000313|EMBL:EFB75092.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
exonuclease SbcD
L2_037_000M1_scaffold_3270_3

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1758..4253
DNA (2496bp) protein (832aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE99_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61653.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sbcC; ATP-dependent dsDNA exonuclease
L2_037_000M1_scaffold_3270_4

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4413..5822
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE98_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61652.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
arginine/lysine/ornithine decarboxylase
L2_037_000M1_scaffold_3270_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5946..6092
DNA (147bp) protein (49aa)
RSAM-modified six-cysteine peptide n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQF4_9FIRM
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:EFB75077.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_3270_6

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6267..7727
DNA (1461bp) protein (487aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE97_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61651.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L2_037_000M1_scaffold_3270_7
unknown

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7991..8176
DNA (186bp) protein (62aa)

This feature has no annotations

L2_037_000M1_scaffold_3270_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8098..9837)
DNA (1740bp) protein (580aa)
Peptidase, M24 family {ECO:0000313|EMBL:EFB75083.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFB75083.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Peptidase, M24 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQG0_9FIRM
L2_037_000M1_scaffold_3270_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10327..11538
DNA (1212bp) protein (404aa)
CobW/P47K family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6M4_9FIRM
Putative GTPases (G3E family)
CobW/P47K family protein {ECO:0000313|EMBL:EEU95820.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_037_000M1_scaffold_3270_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11728..12705
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75080.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
CobW/HypB/UreG, nucleotide-binding domain.
L2_037_000M1_scaffold_3270_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12938..13912)
DNA (975bp) protein (325aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRP7_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EFB74588.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_3270_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13922..15121)
DNA (1200bp) protein (400aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EFB74587.1}; EC=2.6.1.- {ECO:0000313|EMBL:EFB74587.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
aminotransferase (EC:2.6.1.1)
Aminotransferase, class I/II n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRP6_9FIRM
L2_037_000M1_scaffold_3270_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15707..16363)
DNA (657bp) protein (219aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:3.1.3.18)
Putative phosphoglycolate phosphatase, bacterial n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRP5_9FIRM
Putative phosphoglycolate phosphatase, bacterial {ECO:0000313|EMBL:EFB74586.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_000M1_scaffold_3270_14
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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16533..17393
DNA (861bp) protein (287aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRP4_9FIRM
Displaying 14 items

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