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L2_037_000M1_scaffold_3293

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_3293_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..737)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76929.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_3293_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1025..1351)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76930.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Protein of unknown function (DUF1292).
L2_037_000M1_scaffold_3293_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1483..2259
DNA (777bp) protein (259aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI3_9FIRM
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EFB76931.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_000M1_scaffold_3293_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2508..3233)
DNA (726bp) protein (242aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI4_9FIRM
L2_037_000M1_scaffold_3293_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3248..3706)
DNA (459bp) protein (153aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Putative Holliday junction resolvase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI5_9FIRM
conserved hypothetical protein TIGR00250
L2_037_000M1_scaffold_3293_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3992..4537)
DNA (546bp) protein (182aa)
BioY family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI6_9FIRM
BioY family protein {ECO:0000313|EMBL:EFB76934.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_3293_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4556..5536)
DNA (981bp) protein (327aa)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI7_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_3293_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5734..6759)
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase, PfkB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI8_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EFB76936.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_000M1_scaffold_3293_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6856..7818)
DNA (963bp) protein (321aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EFB76937.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EFB76937.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EFB76937.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Entner-Doudoroff aldolase (EC:4.1.3.16 4.1.2.14)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI9_9FIRM
L2_037_000M1_scaffold_3293_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8112..8873
DNA (762bp) protein (254aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJJ0_9FIRM
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:EFB76938.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
transcriptional regulator IclR-like protein
Displaying 10 items

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