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L2_037_000M1_scaffold_3385

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_3385_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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260..1981
DNA (1722bp) protein (574aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EFB75697.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFB75697.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMB2_9FIRM
L2_037_000M1_scaffold_3385_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2003..2344
DNA (342bp) protein (114aa)
Nucleoid-associated protein SUBVAR_05471 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMB1_9FIRM
Nucleoid-associated protein SUBVAR_05471 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
conserved hypothetical protein TIGR00103
L2_037_000M1_scaffold_3385_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2355..2954
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMB0_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
recombination protein RecR
L2_037_000M1_scaffold_3385_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3002..3844)
DNA (843bp) protein (281aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Subdoligranulum variabile DSM 15176 PF7_9FIRM">RepID=D1PPF7_9FIRM
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFB75419.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_000M1_scaffold_3385_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4056..5387
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8G6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDP22510.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
putative efflux protein, MATE family
L2_037_000M1_scaffold_3385_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5469..6662)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75672.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
putative ATP binding protein
L2_037_000M1_scaffold_3385_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6706..6879)
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3X6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98219.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_037_000M1_scaffold_3385_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6956..7240)
DNA (285bp) protein (95aa)
Ribosomal protein L28 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM85_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
LSU ribosomal protein L28P
L2_037_000M1_scaffold_3385_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7343..8017
DNA (675bp) protein (225aa)
Peptidase, M50 family {ECO:0000313|EMBL:EFB75669.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFB75669.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Peptidase, M50 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM84_9FIRM
Zn-dependent proteases
L2_037_000M1_scaffold_3385_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8073..8747
DNA (675bp) protein (225aa)
ScpA/B protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM83_9FIRM
ScpA/B protein {ECO:0000313|EMBL:EFB75668.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
Displaying 10 items

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