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L2_037_000M1_scaffold_2013

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_2013_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1271)
DNA (1269bp) protein (423aa)
Efflux transporter, RND family, MFP subunit (Fragment) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIH2_9FIRM
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFB77331.1}; Flags: Fragment;; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
RND family efflux transporter MFP subunit
L2_037_000M1_scaffold_2013_2
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1427..2419)
DNA (993bp) protein (331aa)
Putative ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BWM6_9CLOT
Putative ABC transporter permease protein {ECO:0000313|EMBL:CDA67630.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
putative ABC transporter permease protein
L2_037_000M1_scaffold_2013_3
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2421..3524)
DNA (1104bp) protein (368aa)
Putative ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HW87_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCY32414.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
putative ABC transporter permease protein
L2_037_000M1_scaffold_2013_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3521..5062)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32413.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC transporter ATP-binding protein
L2_037_000M1_scaffold_2013_5
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5276..6598)
DNA (1323bp) protein (441aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6CQV4_9CLOT
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDA67627.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
putative ABC transporter substrate-binding protein
L2_037_000M1_scaffold_2013_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6894..7475)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77547.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Protein of unknown function (DUF1393).
L2_037_000M1_scaffold_2013_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7893..9473)
DNA (1581bp) protein (527aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EFB77545.1}; EC=6.3.5.4 {ECO:0000313|EMBL:EFB77545.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIG1_9FIRM
L2_037_000M1_scaffold_2013_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10256..11491
DNA (1236bp) protein (412aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP56_9FIRM
L2_037_000M1_scaffold_2013_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11633..14539)
DNA (2907bp) protein (969aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:EFB75553.1}; EC=2.4.1.109 {ECO:0000313|EMBL:EFB75553.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP57_9FIRM
glycosyl transferase
Displaying 9 items

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