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L2_037_000M1_scaffold_2439

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_2439_1
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..193)
DNA (192bp) protein (64aa)
Putative efflux protein, MATE family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LYD0_9FIRM
putative efflux protein, MATE family
MATE efflux family protein {ECO:0000313|EMBL:EDM50828.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L2_037_000M1_scaffold_2439_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(321..1688)
DNA (1368bp) protein (456aa)
UPF0210 protein SUBVAR_04533 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKA2_9FIRM
UPF0210 protein SUBVAR_04533 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_2439_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1701..1970)
DNA (270bp) protein (90aa)
UPF0237 protein SUBVAR_04534 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKA3_9FIRM
UPF0237 protein SUBVAR_04534 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ACT domain-containing protein
L2_037_000M1_scaffold_2439_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2313..3848)
DNA (1536bp) protein (512aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN70_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EFB76005.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
ATPase family associated with various cellular activities (AAA).
L2_037_000M1_scaffold_2439_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3852..5207)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76004.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_2439_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5370..6269)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76003.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_2439_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6346..7710
DNA (1365bp) protein (455aa)
MATE efflux family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN67_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFB76002.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
MATE efflux family protein
L2_037_000M1_scaffold_2439_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7747..8913)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XBB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97007.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L2_037_000M1_scaffold_2439_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9082..10743)
DNA (1662bp) protein (554aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN66_9FIRM
L2_037_000M1_scaffold_2439_10
unknown

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comp(10746..10853)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_037_000M1_scaffold_2439_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11015..12142
DNA (1128bp) protein (376aa)
GDSL-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM27_9FIRM
GDSL-like protein {ECO:0000313|EMBL:EFB76292.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
Displaying 11 items

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