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L2_037_000M1_scaffold_2628

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_2628_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..606
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75736.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Uncharacterised protein family (UPF0153).
L2_037_000M1_scaffold_2628_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(972..1715)
DNA (744bp) protein (248aa)
DnaJ domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMJ5_9FIRM
DnaJ domain protein {ECO:0000313|EMBL:EFB75780.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L2_037_000M1_scaffold_2628_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1708..2562)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75779.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_2628_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2569..2937)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75778.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L2_037_000M1_scaffold_2628_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3220..4581)
DNA (1362bp) protein (454aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFB75777.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFB75777.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMJ2_9FIRM
L2_037_000M1_scaffold_2628_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4612..5481)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMJ1_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFB75775.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
AraC-type DNA-binding domain-containing proteins
L2_037_000M1_scaffold_2628_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5701..7002
DNA (1302bp) protein (434aa)
galactokinase (EC:2.7.1.6)
GHMP kinase, N-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI9_9FIRM
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EFB75774.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_000M1_scaffold_2628_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7371..8147)
DNA (777bp) protein (259aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
pantothenate kinase, type III (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI6_9FIRM
L2_037_000M1_scaffold_2628_9
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8337..9530
DNA (1194bp) protein (398aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFB75770.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EFB75770.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EFB75770.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI5_9FIRM
L2_037_000M1_scaffold_2628_10
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9635..11215
DNA (1581bp) protein (527aa)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EFB75769.1}; EC=6.3.5.4 {ECO:0000313|EMBL:EFB75769.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMI4_9FIRM
Displaying 10 items

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