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L2_037_000M1_scaffold_1465_8

Organism: dasL2_037_000M1_concoct_86_fa

near complete RP 49 / 55 BSCG 48 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 9952..10512

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 189.0
  • Bit_score: 107
  • Evalue 2.30e-21
Putative RNA polymerase sigma-H factor n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNL1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 182.0
  • Bit_score: 250
  • Evalue 1.30e-63
Putative RNA polymerase sigma-H factor {ECO:0000313|EMBL:EFB76146.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 182.0
  • Bit_score: 250
  • Evalue 1.80e-63

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 561
ATGCCTTTACTCGATCAGGATCTGCCCGCCCGCGCACAGCAGGGGGACGAGAACGCGCTTGCCGCACTGATCGCCCGCATGATGCCGGCCATCCGCAAGGGTGCGGCGGAATGCACTGCCCCCGGCCTCGATTTTGACGATGCCGTGCAGGAGGGGCTGATCGGCCTGTTCCATGCTGTGCGCGGGTTTGACCCCGCTGCCGGGCAGACCTTCACGGCCTACGCCGCGGCCTGCATCCGCCACGCGCAGCAGGACGCCCGCCGGGCGGCTCTGCGCAAAAAGCACGCGCCGCTGAACTACAGCGTGCCGCTGCCCGCCGCCGAGGAAAGCACCGACACCCGCCCCGGCCCCGAGGAGCTTGCTATCTTCGGCGAACAGTACGCGGACACGCTCCGCCGTATGCAGACCGAGCTTTCCGCGCTGGAACGCACGGTTTTAATGGCCGGGCTGGAAGGCCGCACCCCCGCGCAGACCGCGCGGGAGCTGGGACTTCCCGCCAAAAACGTGGCCAATGCGCTGGCCCGTGCGCGCCGCAAGCTGCGCGGTGCGCCCACAACCTAG
PROTEIN sequence
Length: 187
MPLLDQDLPARAQQGDENALAALIARMMPAIRKGAAECTAPGLDFDDAVQEGLIGLFHAVRGFDPAAGQTFTAYAAACIRHAQQDARRAALRKKHAPLNYSVPLPAAEESTDTRPGPEELAIFGEQYADTLRRMQTELSALERTVLMAGLEGRTPAQTARELGLPAKNVANALARARRKLRGAPTT*