ggKbase home page

L2_037_000M1_scaffold_1411

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1411_1
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(176..352)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QJK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33164.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_1411_2
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(496..972)
DNA (477bp) protein (159aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q911_9FIRM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:CDC33163.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_1411_3
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(972..1331)
DNA (360bp) protein (120aa)
dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RF97_9FIRM
Dihydroneopterin aldolase {ECO:0000313|EMBL:CDC33162.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_1411_4
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1349..2155)
DNA (807bp) protein (269aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QQR3_9FIRM
L2_037_000M1_scaffold_1411_5
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2195..2749)
DNA (555bp) protein (185aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
folE; GTP cyclohydrolase 1 (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QBH2_9FIRM
L2_037_000M1_scaffold_1411_6
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(2762..3679)
DNA (918bp) protein (306aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BDV3_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD63635.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
L2_037_000M1_scaffold_1411_7
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3911..5260
DNA (1350bp) protein (450aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q905_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
dnaA; Chromosomal replication initiator protein DnaA
L2_037_000M1_scaffold_1411_8
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

5482..6594
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BD74_9FIRM
L2_037_000M1_scaffold_1411_9
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6584..6835
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RF92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33157.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
S4 region, YaaA
L2_037_000M1_scaffold_1411_10
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6774..7916
DNA (1143bp) protein (381aa)
DNA replication and repair protein RecF n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QQQ6_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
DNA replication and repair protein RecF
L2_037_000M1_scaffold_1411_11
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7916..8164
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QBG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33155.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_1411_12
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8211..10169
DNA (1959bp) protein (653aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QJJ4_9FIRM
L2_037_000M1_scaffold_1411_13
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10173..10661
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q901_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33153.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_1411_14
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10661..11194
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RF89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33152.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_1411_15
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11266..13779
DNA (2514bp) protein (838aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=2 Tax=root RepID=R6QQQ0_9FIRM
L2_037_000M1_scaffold_1411_16
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13910..15538
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QBG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33150.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
cell envelope-related function transcriptional attenuator
L2_037_000M1_scaffold_1411_17
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16069..16782
DNA (714bp) protein (238aa)
Predicted branched-chain amino acid permease (Azaleucine resistance) n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RF83_9FIRM
Predicted branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:CDC33147.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L2_037_000M1_scaffold_1411_18
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16779..17108
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QQP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33146.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
AzlD; putative branched-chain amino acid permease
L2_037_000M1_scaffold_1411_19
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17173..17364)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QBG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33145.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_1411_20
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17410..18033)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QJI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33144.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_1411_21
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18174..19571
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33143.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Protein of unknown function (DUF3048).
L2_037_000M1_scaffold_1411_22
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19954..20580)
DNA (627bp) protein (209aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73 5.4.2.1)
Fructose-2 6-bisphosphatase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RF80_9FIRM
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CDC33142.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_1411_23
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20695..21351
DNA (657bp) protein (219aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QQP0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC33141.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_1411_24
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21343..22050)
DNA (708bp) protein (236aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QBF7_9FIRM
L2_037_000M1_scaffold_1411_25
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22475..22807
DNA (333bp) protein (111aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Ribonuclease P protein component n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8Y7_9FIRM
ribonuclease P protein component
L2_037_000M1_scaffold_1411_26
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22807..23064
DNA (258bp) protein (86aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RF76_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_1411_27
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23064..24074
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QQN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC33136.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
YidC/Oxa1 family membrane protein insertase
L2_037_000M1_scaffold_1411_28
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24091..25023
DNA (933bp) protein (311aa)
R3H domain protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QBF3_9FIRM
R3H domain protein {ECO:0000313|EMBL:CDC33135.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Predicted RNA-binding protein
L2_037_000M1_scaffold_1411_29
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25103..26467
DNA (1365bp) protein (455aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
mnmE; tRNA modification GTPase MnmE (EC:3.6.-.-)
tRNA modification GTPase MnmE n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QJH5_9FIRM
L2_037_000M1_scaffold_1411_30
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26485..28350
DNA (1866bp) protein (622aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8Y2_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
glucose-inhibited division protein A
Displaying items 1-30 of 45 in total

View Taxonomy