ggKbase home page

L2_037_000M1_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_36_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)
TnpX site-specific recombinase n=2 Tax=Clostridiales RepID=U2BH26_9CLOT
TnpX site-specific recombinase {ECO:0000313|EMBL:ERI71168.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_037_000M1_scaffold_36_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(349..6195)
DNA (5847bp) protein (1949aa)
Superfamily II DNA and RNA helicase n=4 Tax=root RepID=E7GBS9_9FIRM
Superfamily II DNA and RNA helicase {ECO:0000313|EMBL:EFW04491.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
DNA methylase
L2_037_000M1_scaffold_36_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6195..6815)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WX19_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY88143.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_037_000M1_scaffold_36_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6815..7060)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LQW2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95602.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L2_037_000M1_scaffold_36_5
unknown

Not on your lists

comp(7084..7182)
DNA (99bp) protein (33aa)

This feature has no annotations

L2_037_000M1_scaffold_36_6
unknown

Not on your lists

comp(7202..7474)
DNA (273bp) protein (91aa)

This feature has no annotations

L2_037_000M1_scaffold_36_7
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7467..11033)
DNA (3567bp) protein (1189aa)
Cna protein B-type domain n=1 Tax=Clostridium sp. CAG:678 RepID=R5KNW7_9CLOT
Cna protein B-type domain {ECO:0000313|EMBL:CCY66779.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Cna protein B-type domain.
L2_037_000M1_scaffold_36_8
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11114..11704)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LRS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90448.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
L2_037_000M1_scaffold_36_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11890..12828)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CHH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD26186.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ParB-like partition proteins
L2_037_000M1_scaffold_36_10
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12782..13618)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VV08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72648.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
Chromosome partitioning protein parA
L2_037_000M1_scaffold_36_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14130..14702)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FNM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95796.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Rab geranylgeranyl transferase alpha-subunit, insert domain.
L2_037_000M1_scaffold_36_12
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(14695..15975)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6ENT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA91627.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
hypothetical protein
L2_037_000M1_scaffold_36_13
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16802..17410)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QAU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32925.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_36_14
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17410..17871)
DNA (462bp) protein (154aa)
SsrA-binding protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QPX5_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
SsrA-binding protein
L2_037_000M1_scaffold_36_15
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17891..18490)
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Eubacterium sp. CAG:251 RepID=R6REN4_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
recombination protein RecR
L2_037_000M1_scaffold_36_16
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18655..18999)
DNA (345bp) protein (115aa)
Nucleoid-associated protein BN563_01006 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q895_9FIRM
Nucleoid-associated protein BN563_01006 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_36_17
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19018..20712)
DNA (1695bp) protein (565aa)
DNA polymerase III subunit gamma and tau n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QIX8_9FIRM
DNA polymerase III subunit gamma and tau {ECO:0000313|EMBL:CDC32929.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
DNA polymerase III subunits gamma and tau
L2_037_000M1_scaffold_36_18
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20943..21449)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QAV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32930.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_36_19
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21510..21836)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QPY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32931.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
SCP-2 sterol transfer family.
L2_037_000M1_scaffold_36_20
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22018..22374
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=1 Tax=Eubacterium sp. CAG:251 RepID=R6REN9_9FIRM
Stage V sporulation protein AE {ECO:0000313|EMBL:CDC32932.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
stage V sporulation protein AE
L2_037_000M1_scaffold_36_21
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22437..23456)
DNA (1020bp) protein (340aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6REP5_9FIRM
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:CDC32937.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
nucleoside-diphosphate-sugar epimerase
L2_037_000M1_scaffold_36_22
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23542..24708)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8A4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32938.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
cation diffusion facilitator family transporter
L2_037_000M1_scaffold_36_23
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24838..25794
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QIZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32939.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_36_24
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25887..26570)
DNA (684bp) protein (228aa)
HAD superfamily (subfamily IA) hydrolase, TIGR02254 (EC:3.8.1.2)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QAW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32940.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_36_25
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26657..26827)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QPZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32941.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_36_26
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26860..29049)
DNA (2190bp) protein (730aa)
Ferrous iron transport protein B n=1 Tax=Eubacterium sp. CAG:251 RepID=R6REP8_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:CDC32942.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
ferrous iron transporter FeoB
L2_037_000M1_scaffold_36_27
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29159..29380)
DNA (222bp) protein (74aa)
FeoA domain protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8A7_9FIRM
FeoA domain protein {ECO:0000313|EMBL:CDC32943.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Fe2+ transport system protein A
L2_037_000M1_scaffold_36_28
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29411..29623)
DNA (213bp) protein (71aa)
FeoA family protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QIZ5_9FIRM
FeoA family protein {ECO:0000313|EMBL:CDC32944.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
feoA; ferrous iron transport protein A
L2_037_000M1_scaffold_36_29
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29817..30179
DNA (363bp) protein (121aa)
Iron-dependent transcriptional regulator n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QAW8_9FIRM
Iron-dependent transcriptional regulator {ECO:0000313|EMBL:CDC32945.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
DtxR family iron (metal) dependent repressor
L2_037_000M1_scaffold_36_30
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30240..31640)
DNA (1401bp) protein (467aa)
Transporter major facilitator family protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QPZ5_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CDC32946.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
Displaying items 1-30 of 153 in total

View Taxonomy