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L2_037_000M1_scaffold_569

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_569_1
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..827)
DNA (825bp) protein (275aa)
Plasmid recombination enzyme n=2 Tax=root RepID=R5DR37_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:CCX82633.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Plasmid recombination enzyme.
L2_037_000M1_scaffold_569_2
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1017..2237)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MU21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02255.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L2_037_000M1_scaffold_569_3
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2227..2562)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N7J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02256.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L2_037_000M1_scaffold_569_4
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2567..3643)
DNA (1077bp) protein (359aa)
Site-specific recombinase phage integrase family n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NWZ3_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDC02257.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Site-specific recombinase XerD
L2_037_000M1_scaffold_569_5
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3643..3834)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MRE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02258.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Sugar-specific transcriptional regulator TrmB.
L2_037_000M1_scaffold_569_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4117..4638
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RQF0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC36682.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Helix-turn-helix.
L2_037_000M1_scaffold_569_7
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4682..5299
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5WG33_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CCZ94756.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
L2_037_000M1_scaffold_569_8
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5521..7047)
DNA (1527bp) protein (509aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8K1_9FIRM
L2_037_000M1_scaffold_569_9
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7346..8620)
DNA (1275bp) protein (425aa)
Putative aminopeptidase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RC79_9FIRM
Putative aminopeptidase {ECO:0000313|EMBL:CDC32102.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_569_10
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8621..10195)
DNA (1575bp) protein (525aa)
Beta-N-acetylhexosaminidase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q5Y6_9FIRM
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:CDC32103.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
putative glycosyl hydrolase lipoprotein
L2_037_000M1_scaffold_569_11
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10304..10948)
DNA (645bp) protein (215aa)
HAD hydrolase family IA variant 1 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QGJ5_9FIRM
HAD hydrolase family IA variant 1 {ECO:0000313|EMBL:CDC32104.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
phosphatase
L2_037_000M1_scaffold_569_12
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11084..12628)
DNA (1545bp) protein (515aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QML9_9FIRM
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:CDC32106.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
peptidase S1 and S6 chymotrypsin/Hap
L2_037_000M1_scaffold_569_13
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12628..14142)
DNA (1515bp) protein (505aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RC82_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_037_000M1_scaffold_569_14
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14195..14890)
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q5Z0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDC32108.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
two component transcriptional regulator, winged helix family
L2_037_000M1_scaffold_569_15
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15015..16253)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QGJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32109.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Predicted ATPase (AAA+ superfamily)
L2_037_000M1_scaffold_569_16
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16464..17129
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32110.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
GntR family transcriptional regulator
L2_037_000M1_scaffold_569_17
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17266..18282
DNA (1017bp) protein (339aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=2 Tax=root RepID=R6QMM3_9FIRM
L2_037_000M1_scaffold_569_18
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18662..19156
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RC85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32112.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L2_037_000M1_scaffold_569_19
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19258..19602)
DNA (345bp) protein (115aa)
50S ribosomal protein L17 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q5Z3_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
50S ribosomal protein L17
L2_037_000M1_scaffold_569_20
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19617..20573)
DNA (957bp) protein (319aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QGK2_9FIRM
L2_037_000M1_scaffold_569_21
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20633..21232)
DNA (600bp) protein (200aa)
30S ribosomal protein S4 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8L3_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
SSU ribosomal protein S4P
L2_037_000M1_scaffold_569_22
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21256..21651)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=2 Tax=Firmicutes RepID=R6QMM6_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
30S ribosomal protein S11
L2_037_000M1_scaffold_569_23
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists


comp(21670..22038)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=2 Tax=Firmicutes RepID=R6RC90_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
SSU ribosomal protein S13P
L2_037_000M1_scaffold_569_24
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(22071..22184)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Firmicutes RepID=R6Q5Z7_9FIRM
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
rpmJ; 50S ribosomal protein L36
L2_037_000M1_scaffold_569_25
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22205..22423)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Firmicutes RepID=R6QGK6_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
infA; translation initiation factor IF-1
L2_037_000M1_scaffold_569_26
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22518..23267)
DNA (750bp) protein (250aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q8L6_9FIRM
L2_037_000M1_scaffold_569_27
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23269..23901)
DNA (633bp) protein (211aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QMN0_9FIRM
L2_037_000M1_scaffold_569_28
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23923..25272)
DNA (1350bp) protein (450aa)
Protein translocase subunit SecY n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RC94_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
preprotein translocase subunit SecY
L2_037_000M1_scaffold_569_29
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25272..25715)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q602_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
LSU ribosomal protein L15P
L2_037_000M1_scaffold_569_30
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25733..25912)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QGK9_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
LSU ribosomal protein L30P
Displaying items 1-30 of 51 in total

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