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L2_037_000M1_scaffold_891

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_891_1
unknown

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comp(30..146)
DNA (117bp) protein (39aa)

This feature has no annotations

L2_037_000M1_scaffold_891_2
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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219..1577
DNA (1359bp) protein (453aa)
Citrate transporter n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q9R7_9FIRM
Citrate transporter {ECO:0000313|EMBL:CDC32525.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
arsenical pump membrane protein
L2_037_000M1_scaffold_891_3
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1591..2187
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QNW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32526.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
cytidylate kinase
L2_037_000M1_scaffold_891_4
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2327..3076
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RDH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32527.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
transcriptional regulator, AraC family
L2_037_000M1_scaffold_891_5
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3119..4315)
DNA (1197bp) protein (399aa)
Glycosyl hydrolase family 25 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q765_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CDC32528.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Fibronectin type III domain./Regulator of chromosome condensation (RCC1) repeat.
L2_037_000M1_scaffold_891_6
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4330..5085)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QHU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32529.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
polysaccharide deacetylase
L2_037_000M1_scaffold_891_7
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5221..5988
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q9R9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32530.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_891_8
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5985..6434
DNA (450bp) protein (150aa)
Integral membrane protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QNW4_9FIRM
Integral membrane protein {ECO:0000313|EMBL:CDC32531.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_891_9
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6490..7014)
DNA (525bp) protein (175aa)
Predicted oxidoreductase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RDI0_9FIRM
Predicted oxidoreductase {ECO:0000313|EMBL:CDC32532.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_891_10
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7143..9290
DNA (2148bp) protein (716aa)
Tex-like protein N-terminal domain protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q770_9FIRM
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CDC32533.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Tex-like protein
L2_037_000M1_scaffold_891_11
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9524..9802
DNA (279bp) protein (93aa)
PF01863 domain protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QHU6_9FIRM
PF01863 domain protein {ECO:0000313|EMBL:CDC32534.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_891_12
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10296..11873
DNA (1578bp) protein (526aa)
L-ribulokinase (Putative) n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q9L6_9FIRM
L-ribulokinase (Putative) {ECO:0000313|EMBL:CDC32495.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L-ribulokinase
L2_037_000M1_scaffold_891_13
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11885..13357
DNA (1473bp) protein (491aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QHN9_9FIRM
L2_037_000M1_scaffold_891_14
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13371..14081
DNA (711bp) protein (237aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q700_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:CDC32493.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L-ribulose-5-phosphate 4-epimerase
L2_037_000M1_scaffold_891_15
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14092..15750
DNA (1659bp) protein (553aa)
VanW-like protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RDB9_9FIRM
VanW-like protein {ECO:0000313|EMBL:CDC32492.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Glycoside Hydrolase Family 5 protein
L2_037_000M1_scaffold_891_16
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15892..16770
DNA (879bp) protein (293aa)
TIGR00255 family protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RCS4_9FIRM
TIGR00255 family protein {ECO:0000313|EMBL:CDC32317.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
conserved hypothetical protein TIGR00255
L2_037_000M1_scaffold_891_17
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16777..17028
DNA (252bp) protein (84aa)
UPF0296 protein ThecoDRAFT_3251 n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QN46_9FIRM
UPF0296 protein ThecoDRAFT_3251 {ECO:0000313|EMBL:CDC32316.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_891_18
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17018..17605
DNA (588bp) protein (196aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q924_9FIRM
L2_037_000M1_scaffold_891_19
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17620..17835
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QH35_9FIRM
L2_037_000M1_scaffold_891_20
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17835..20054
DNA (2220bp) protein (740aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Primosomal protein N n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q6F4_9FIRM
primosomal protein N'
L2_037_000M1_scaffold_891_21
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20065..20520
DNA (456bp) protein (152aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
def; Peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RCR9_9FIRM
L2_037_000M1_scaffold_891_22
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20532..21458
DNA (927bp) protein (309aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QN41_9FIRM
L2_037_000M1_scaffold_891_23
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21464..22159
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q920_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32310.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L2_037_000M1_scaffold_891_24
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22156..23394
DNA (1239bp) protein (413aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
ribosomal RNA small subunit methyltransferase RsmB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QH29_9FIRM
L2_037_000M1_scaffold_891_25
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23387..24421
DNA (1035bp) protein (345aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q6F0_9FIRM
L2_037_000M1_scaffold_891_26
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24421..25149
DNA (729bp) protein (243aa)
Phosphoprotein phosphatase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6RCR1_9FIRM
Phosphoprotein phosphatase {ECO:0000313|EMBL:CDC32307.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
protein serine/threonine phosphatase
L2_037_000M1_scaffold_891_27
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25165..27225
DNA (2061bp) protein (687aa)
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QN37_9FIRM
Serine/threonine protein kinase with PASTA sensor(S) {ECO:0000313|EMBL:CDC32306.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
serine/threonine protein kinase with PASTA sensor(s)
L2_037_000M1_scaffold_891_28
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27227..28114
DNA (888bp) protein (296aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
rsgA; ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q916_9FIRM
L2_037_000M1_scaffold_891_29
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28099..28260
DNA (162bp) protein (54aa)
Thiamine pyrophosphokinase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QH23_9FIRM
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CDC32304.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
Displaying 29 items

View Taxonomy