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L2_037_016G1_scaffold_75

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_016G1_scaffold_75_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1149)
DNA (1149bp) protein (383aa)
Glucan-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A104_CLOBU
Glucan-binding protein {ECO:0000313|EMBL:ENZ30153.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
surface protein PspC
L2_037_016G1_scaffold_75_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1362..3992)
DNA (2631bp) protein (877aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNB6_CLOPF
cell wall binding repeat-containing protein/zinc carboxypeptidase
Cell wall binding repeat protein/zinc carboxypeptidase family {ECO:0000313|EMBL:EDT22325.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_037_016G1_scaffold_75_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4144..5283
DNA (1140bp) protein (380aa)
Glycosyl transferase, group 1 family protein n=2 Tax=Clostridium perfringens RepID=B1BNG5_CLOPF
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT24954.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
group 1 glycosyl transferase
L2_037_016G1_scaffold_75_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5314..6609)
DNA (1296bp) protein (432aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNG4_CLOPF
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDT16744.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
polysaccharide biosynthesis protein
L2_037_016G1_scaffold_75_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6668..7609)
DNA (942bp) protein (314aa)
Putative Glycosyltransferase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F7M1_9CLOT
Putative Glycosyltransferase {ECO:0000313|EMBL:CDG00998.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
glycosyl transferase family protein
L2_037_016G1_scaffold_75_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7621..8844)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CST7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18231.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_016G1_scaffold_75_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8859..9938)
DNA (1080bp) protein (360aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUU5_CLOPF
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT14508.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
glycosyl transferase, group 1 family protein
L2_037_016G1_scaffold_75_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9942..10664)
DNA (723bp) protein (241aa)
tagA; N-acetyl-mannosamine transferase (EC:2.4.1.187)
N-acetyl-mannosamine transferase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUU4_CLOPF
N-acetyl-mannosamine transferase {ECO:0000313|EMBL:EDT14549.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_016G1_scaffold_75_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10683..11345)
DNA (663bp) protein (221aa)
Galactosyl transferase CpsE {ECO:0000313|EMBL:EDT14511.1}; EC=2.7.8.- {ECO:0000313|EMBL:EDT14511.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Galactosyl transferase CpsE n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUU3_CLOPF
glycosyltransferase
L2_037_016G1_scaffold_75_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11377..12177)
DNA (801bp) protein (267aa)
Phosphatase YidA {ECO:0000313|EMBL:EDT14509.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDT14509.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
HAD family hydrolase n=7 Tax=Clostridium perfringens RepID=H7CT52_CLOPF
HAD family hydrolase
L2_037_016G1_scaffold_75_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12553..13158
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNA2_CLOPF
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ABG85600.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_037_016G1_scaffold_75_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13370..14965
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=10 Tax=Clostridium perfringens RepID=H7CT50_CLOPF
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_037_016G1_scaffold_75_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15226..18555
DNA (3330bp) protein (1110aa)
Membrane protein, MmpL family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTJ6_CLOP1
MmpL family membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17851.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_016G1_scaffold_75_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18763..19602)
DNA (840bp) protein (280aa)
HAD hydrolase, IIB family n=3 Tax=Clostridium perfringens RepID=Q0TTJ7_CLOP1
HAD family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB80315.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_037_016G1_scaffold_75_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19994..20188
DNA (195bp) protein (65aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CT47_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14543.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_016G1_scaffold_75_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20281..21576)
DNA (1296bp) protein (432aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
M18 family aminopeptidase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTJ9_CLOP1
aminopeptidase 2
L2_037_016G1_scaffold_75_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21718..23379)
DNA (1662bp) protein (554aa)
Putative enterotoxin, EntD n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTK0_CLOP1
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase, family 2 {ECO:0000313|EMBL:EDT14548.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_016G1_scaffold_75_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23622..24803
DNA (1182bp) protein (394aa)
Cation efflux family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTK1_CLOP1
cation efflux family protein
Cation efflux family protein {ECO:0000313|EMBL:EDS81609.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_037_016G1_scaffold_75_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24905..26749)
DNA (1845bp) protein (615aa)
Sulfatase domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTK2_CLOP1
sulfatase
Sulfatase domain protein {ECO:0000313|EMBL:EDT14533.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_016G1_scaffold_75_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27001..28809)
DNA (1809bp) protein (603aa)
Sulfatase family protein n=3 Tax=Clostridium perfringens RepID=Q0TTK3_CLOP1
sulfatase
Sulfatase family protein {ECO:0000313|EMBL:EDT14521.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_016G1_scaffold_75_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29027..29749)
DNA (723bp) protein (241aa)
Amino acid ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=B1BUT1_CLOPF
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT14539.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
amino acid ABC transporter
L2_037_016G1_scaffold_75_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29743..30417)
DNA (675bp) protein (225aa)
His/Glu/Gln/Arg/opine ABC transporter permease n=2 Tax=Clostridium perfringens RepID=H7CT40_CLOPF
His/Glu/Gln/Arg/opine ABC transporter permease {ECO:0000313|EMBL:EIA17842.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
His/Glu/Gln/Arg/opine ABC transporter permease
L2_037_016G1_scaffold_75_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30448..31284)
DNA (837bp) protein (279aa)
Amino acid ABC transporter, amino acid-binding protein n=2 Tax=Clostridium perfringens RepID=B1BUT0_CLOPF
Amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:EDT14545.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
amino acid ABC transporter
L2_037_016G1_scaffold_75_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31740..33860)
DNA (2121bp) protein (707aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative helicase n=2 Tax=Clostridium perfringens RepID=B1BUS9_CLOPF
helicase
L2_037_016G1_scaffold_75_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34080..36233)
DNA (2154bp) protein (718aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000255|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_01458};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=FTSH_CLOP1
ftsH; ATP-dependent metalloprotease FtsH
L2_037_016G1_scaffold_75_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36258..36788)
DNA (531bp) protein (177aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Signal peptidase I n=9 Tax=Clostridium perfringens RepID=H7CT36_CLOPF
L2_037_016G1_scaffold_75_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36791..37009)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BUS6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14510.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_016G1_scaffold_75_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37466..38761)
DNA (1296bp) protein (432aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Diaminopimelate decarboxylase n=5 Tax=Clostridium perfringens RepID=Q0TTL1_CLOP1
L2_037_016G1_scaffold_75_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39172..39711)
DNA (540bp) protein (180aa)
NUDIX family hydrolase n=5 Tax=Clostridium perfringens RepID=H7CT33_CLOPF
NUDIX family hydrolase
NUDIX family hydrolase {ECO:0000313|EMBL:EIA17835.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_016G1_scaffold_75_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40125..40817)
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog n=4 Tax=Clostridium perfringens RepID=SFSA_CLOP1
sfsA; sugar fermentation stimulation protein A
Sugar fermentation stimulation protein homolog {ECO:0000255|HAMAP-Rule:MF_00095}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Displaying 30 items

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