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L2_037_016G1_scaffold_107

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_016G1_scaffold_107_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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207..977
DNA (771bp) protein (257aa)
Putative peptidase n=2 Tax=Clostridium perfringens RepID=B1RGF1_CLOPF
Putative peptidase {ECO:0000313|EMBL:EDT26960.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
peptidase
L2_037_016G1_scaffold_107_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1052..1333
DNA (282bp) protein (94aa)
Stage III sporulation protein D n=11 Tax=Clostridium perfringens RepID=H7CYK5_CLOPF
spoIIID; stage III sporulation protein D
Stage III sporulation protein D {ECO:0000313|EMBL:EDT15573.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_016G1_scaffold_107_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1394..2431
DNA (1038bp) protein (346aa)
Rod shape-determining protein Mbl n=9 Tax=Clostridium perfringens RepID=H7CYK4_CLOPF
mbl; rod shape-determining protein Mbl
Mbl protein {ECO:0000313|EMBL:EDT15625.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_016G1_scaffold_107_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2470..3000)
DNA (531bp) protein (177aa)
Putative sporulation protein YyaC n=3 Tax=Clostridium perfringens RepID=H7CYK3_CLOPF
Putative sporulation protein YyaC {ECO:0000313|EMBL:EIA16185.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
yyaC; sporulation protein YyaC
L2_037_016G1_scaffold_107_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3106..3750
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGF5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26976.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_037_016G1_scaffold_107_6
unknown

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comp(3861..4448)
DNA (588bp) protein (196aa)

This feature has no annotations

L2_037_016G1_scaffold_107_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4969..6144
DNA (1176bp) protein (392aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
S-adenosylmethionine synthase n=9 Tax=Clostridium perfringens RepID=METK_CLOP1
L2_037_016G1_scaffold_107_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6281..7417)
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Clostridium perfringens RepID=B1BKB9_CLOPF
L2_037_016G1_scaffold_107_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7554..9788
DNA (2235bp) protein (745aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Exodeoxyribonuclease V alpha subunit n=3 Tax=Clostridium perfringens RepID=Q8XIE6_CLOPE
recD; RecD/TraA family helicase
L2_037_016G1_scaffold_107_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9806..10768
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RLW2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT73197.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_037_016G1_scaffold_107_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10744..11403
DNA (660bp) protein (220aa)
ComF family protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTF6_CLOPF
ComF protein, homolog {ECO:0000313|EMBL:EDT15630.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
competence protein FC
L2_037_016G1_scaffold_107_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11855..12394
DNA (540bp) protein (180aa)
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_016G1_scaffold_107_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12630..15152
DNA (2523bp) protein (841aa)
Protein translocase subunit SecA n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=SECA_CLOPE
Protein translocase subunit SecA {ECO:0000255|HAMAP-Rule:MF_01382}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
secA; preprotein translocase subunit SecA
L2_037_016G1_scaffold_107_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15406..15528
DNA (123bp) protein (41aa)
Peptide chain release factor 2 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RF2_CLOPS
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000255|HAMAP-Rule:MF_00094}; Short=RF-2 {ECO:0000255|HAMAP-Rule:MF_00094};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_037_016G1_scaffold_107_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15530..16501
DNA (972bp) protein (324aa)
peptide chain release factor 2 n=1 Tax=Clostridium perfringens RepID=UPI0000DB5E22
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_016G1_scaffold_107_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16750..18093)
DNA (1344bp) protein (448aa)
Peptidase family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNE2_CLOP1
peptidase
Peptidase family protein {ECO:0000313|EMBL:EDS79815.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_037_016G1_scaffold_107_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18205..20367
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIF3_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:BAB81874.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
hypothetical protein
L2_037_016G1_scaffold_107_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20715..21311
DNA (597bp) protein (199aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CYJ1_CLOPF
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_016G1_scaffold_107_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21593..22039)
DNA (447bp) protein (149aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EDT26980.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EDT26980.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
rimI; ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGG7_CLOPF
L2_037_016G1_scaffold_107_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22039..22743)
DNA (705bp) protein (235aa)
Glycoprotease family protein n=2 Tax=Clostridium perfringens RepID=B1RGG8_CLOPF
Glycoprotease family protein {ECO:0000313|EMBL:EDT26950.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
glycoprotease family protein
L2_037_016G1_scaffold_107_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22737..23201)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGG9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26973.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_037_016G1_scaffold_107_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23360..23845)
DNA (486bp) protein (162aa)
Transposase, IS605 OrfB family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGH0_CLOPF
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EDT26958.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
IS605 family transposase OrfB
Displaying 22 items

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