ggKbase home page

L2_037_047G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 130 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_047G1_scaffold_42_1
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(320..970)
DNA (651bp) protein (217aa)
FCD domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBB1_9ENTR
FCD domain protein {ECO:0000313|EMBL:EFE09471.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
GntR-family transcriptional regulator
L2_037_047G1_scaffold_42_2
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1056..2258
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS 1 n=3 Tax=Salmonella enterica I RepID=V1LS79_SALET
Major facilitator superfamily protein {ECO:0000313|EMBL:ETE49794.1}; TaxID=1329901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Infantis str. 119944.;"
major facilitator superfamily protein
L2_037_047G1_scaffold_42_3
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2299..2889
DNA (591bp) protein (197aa)
Isochorismatase family protein {ECO:0000313|EMBL:EFE09470.1}; EC=3.-.-.- {ECO:0000313|EMBL:EFE09470.1};; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
Isochorismatase family protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBA9_9ENTR
isochorismatase hydrolase
L2_037_047G1_scaffold_42_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3145..3669)
DNA (525bp) protein (175aa)
N-acetyltransferase GCN5 n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QUS8_CITFR
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AHY13302.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3779..4537
DNA (759bp) protein (253aa)
trans-aconitate methyltransferase (EC:2.1.1.144)
Trans-aconitate 2-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147}; EC=2.1.1.144 {ECO:0000256|HAMAP-Rule:MF_00560, ECO:0000256|SAAS:SAAS00012147};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Trans-aconitate 2-methyltransferase n=1 Tax=Citrobacter sp. KTE32 RepID=R8UXS8_9ENTR
L2_037_047G1_scaffold_42_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4668..5048
DNA (381bp) protein (127aa)
Glutathione-dependent formaldehyde-activating protein n=3 Tax=Citrobacter RepID=J1FWF5_9ENTR
ribulose-phosphate 3-epimerase
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:AHY13300.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5041..5955)
DNA (915bp) protein (305aa)
Inner membrane protein n=1 Tax=Citrobacter sp. KTE151 RepID=R8X1D4_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY13299.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6165..7616)
DNA (1452bp) protein (484aa)
altronate oxidoreductase (EC:1.1.1.58)
Altronate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00670}; EC=1.1.1.58 {ECO:0000256|HAMAP-Rule:MF_00670};; Tagaturonate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00670}; Tagaturonate reductase {ECO:0000256|HAMAP-Rule:MF_00670}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Altronate oxidoreductase n=1 Tax=Citrobacter sp. KTE32 RepID=R8VJF0_9ENTR
L2_037_047G1_scaffold_42_9
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7723..8250)
DNA (528bp) protein (176aa)
N-acetyltransferase GCN5 n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CNE8_CITFR
Putative acetyltransferase {ECO:0000313|EMBL:GAL44069.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
GCN5 family acetyltransferase
L2_037_047G1_scaffold_42_10
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8331..8690)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8VE41_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAL44070.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_037_047G1_scaffold_42_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8690..9616)
DNA (927bp) protein (309aa)
glutaminase (EC:3.5.1.2)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Glutaminase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9N3_9ENTR
L2_037_047G1_scaffold_42_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9767..11155)
DNA (1389bp) protein (463aa)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9N4_9ENTR
succinate dehydrogenase
Succinate dehydrogenase {ECO:0000313|EMBL:AHY13294.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11258..12118
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4H2_9ENTR
LysR family transcriptional regulator {ECO:0000313|EMBL:ETX62905.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_037_047G1_scaffold_42_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12213..13409
DNA (1197bp) protein (399aa)
Probable sugar efflux transporter n=1 Tax=Citrobacter sp. 30_2 RepID=C1M4H1_9ENTR
arabinose transporter
Probable sugar efflux transporter {ECO:0000256|HAMAP-Rule:MF_00517}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_15
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13447..14112)
DNA (666bp) protein (222aa)
Membrane protein, MarC family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9P5_9ENTR
hypothetical protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
L2_037_047G1_scaffold_42_16
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14370..14804
DNA (435bp) protein (145aa)
Multiple antibiotic resistance protein marR n=2 Tax=Citrobacter RepID=C1M4G9_9ENTR
Transcriptional repressor MarR {ECO:0000313|EMBL:GAL44083.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
transcriptional regulator
L2_037_047G1_scaffold_42_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14824..15207
DNA (384bp) protein (128aa)
Multiple antibiotic resistance protein marA n=11 Tax=Citrobacter RepID=C1M4G8_9ENTR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KJC12344.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L2_037_047G1_scaffold_42_18
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15235..15453
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SJ98_CITFR
Multiple antibiotic resistance protein MarB {ECO:0000313|EMBL:GAL44085.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
hypothetical protein
L2_037_047G1_scaffold_42_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15487..16386)
DNA (900bp) protein (300aa)
O-acetylserine/cysteine export protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R6U5_CITFR
acetylserine transporter
Acetylserine transporter {ECO:0000313|EMBL:AHY13288.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16585..17772
DNA (1188bp) protein (396aa)
Transporter, major facilitator family protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9Q1_9ENTR
transporter
Transporter {ECO:0000313|EMBL:AHY13287.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17813..18511)
DNA (699bp) protein (233aa)
Urea ABC transporter, ATP-binding protein UrtE n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9Q2_9ENTR
urea ABC transporter ATP-binding protein
Urea ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHY13286.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_22
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18521..19318)
DNA (798bp) protein (266aa)
Urea ABC transporter, ATP-binding protein UrtD n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9Q3_9ENTR
Urea ABC transporter, ATP-binding protein UrtD {ECO:0000313|EMBL:EFE08914.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
hypothetical protein
L2_037_047G1_scaffold_42_23
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19318..20391)
DNA (1074bp) protein (358aa)
Urea ABC transporter, permease protein UrtC n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9Q4_9ENTR
Urea ABC transporter, permease protein UrtC {ECO:0000313|EMBL:EFE08915.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
amino acid ABC transporter permease
L2_037_047G1_scaffold_42_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20391..21965)
DNA (1575bp) protein (525aa)
Urea ABC transporter, permease protein UrtB n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9Q5_9ENTR
urea ABC transporter permease
Urea ABC transporter permease {ECO:0000313|EMBL:AHY13283.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22009..23280)
DNA (1272bp) protein (424aa)
Urea ABC transporter, urea binding protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9Q6_9ENTR
branched-chain amino acid ABC transporter substrate-binding protein
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHY13282.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_26
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23766..23861
DNA (96bp) protein (32aa)
Uncharacterized protein n=10 Tax=Citrobacter RepID=J0LSS2_9ENTR
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOQ49138.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
L2_037_047G1_scaffold_42_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24145..25071)
DNA (927bp) protein (309aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9R0_9ENTR
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AHY13280.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25237..27282)
DNA (2046bp) protein (682aa)
Peptidyl-dipeptidase dcp n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B9R1_9ENTR
dipeptidyl carboxypeptidase II
Dipeptidyl carboxypeptidase II {ECO:0000313|EMBL:AHY13279.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27420..28166
DNA (747bp) protein (249aa)
NADP-dependent L-serine/L-allo-threonine dehydrogenase ydfG n=2 Tax=Citrobacter RepID=R8VFJ8_9ENTR
malonic semialdehyde reductase
Malonic semialdehyde reductase {ECO:0000313|EMBL:AHY13278.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_42_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28253..28939
DNA (687bp) protein (229aa)
Transcriptional regulator n=2 Tax=Citrobacter RepID=R8VE26_9ENTR
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AHY13277.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Displaying items 1-30 of 130 in total

View Taxonomy