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L2_037_047G1_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_047G1_scaffold_111_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..87
DNA (87bp) protein (29aa)
30S ribosomal protein S1 n=3 Tax=Escherichia coli RepID=N3GNF8_ECOLX
hypothetical protein
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
L2_037_047G1_scaffold_111_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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247..531
DNA (285bp) protein (95aa)
Integration host factor subunit beta n=12 Tax=Enterobacteriaceae RepID=C1M9J6_9ENTR
ihfB; integration host factor subunit beta
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_037_047G1_scaffold_111_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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737..3001
DNA (2265bp) protein (755aa)
Competence protein ComEC n=1 Tax=Citrobacter sp. KTE30 RepID=R8V081_9ENTR
Competence protein ComEC {ECO:0000313|EMBL:AHY12698.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
competence protein ComEC
L2_037_047G1_scaffold_111_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3038..4786
DNA (1749bp) protein (583aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBV1_9ENTR
lipid transporter ATP-binding/permease
L2_037_047G1_scaffold_111_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4783..5760
DNA (978bp) protein (326aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Tetraacyldisaccharide 4'-kinase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBV0_9ENTR
L2_037_047G1_scaffold_111_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5802..7034
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBU9_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY12701.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7086..7268
DNA (183bp) protein (61aa)
UPF0434 protein ROD_09851 n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TS53_CITRI
hypothetical protein
UPF0434 protein CFNIH1_14610 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7265..8011
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBU7_9ENTR
L2_037_047G1_scaffold_111_9
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8177..9070
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBU6_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAL44659.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_037_047G1_scaffold_111_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9163..9927)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBU5_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY12705.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10063..10866
DNA (804bp) protein (268aa)
Methyltransferase domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBU4_9ENTR
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AHY12706.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10859..12181
DNA (1323bp) protein (441aa)
Chromosome partition protein MukF n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBN7_SHIFL
condesin subunit F
Chromosome partition protein MukF {ECO:0000256|HAMAP-Rule:MF_01803, ECO:0000256|SAAS:SAAS00085357}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12162..12866
DNA (705bp) protein (235aa)
Chromosome partition protein MukE n=2 Tax=Citrobacter RepID=R8VF35_9ENTR
condesin subunit E
Chromosome partition protein MukE {ECO:0000256|HAMAP-Rule:MF_01802}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12866..17326
DNA (4461bp) protein (1487aa)
Chromosome partition protein MukB n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBU1_9ENTR
mukB; cell division protein MukB
Chromosome partition protein MukB {ECO:0000256|HAMAP-Rule:MF_01800, ECO:0000256|SAAS:SAAS00054219}; Structural maintenance of chromosome-related protein {ECO:0000256|HAMAP-Rule:MF_01800}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17587..19338
DNA (1752bp) protein (584aa)
Putative peptidoglycan binding domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBU0_9ENTR
Murein L,D-transpeptidase {ECO:0000313|EMBL:AHY12710.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
murein L,D-transpeptidase
L2_037_047G1_scaffold_111_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19516..20064
DNA (549bp) protein (183aa)
Uncharacterized protein n=4 Tax=Enterobacteriaceae RepID=C1M9L0_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDF20349.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
L2_037_047G1_scaffold_111_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20093..20740
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1M9L1_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY12712.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_18
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20795..21985)
DNA (1191bp) protein (397aa)
Aspartate aminotransferase n=2 Tax=Citrobacter RepID=R8VF40_9ENTR
Aspartate aminotransferase {ECO:0000313|EMBL:GAL44650.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
aromatic amino acid aminotransferase
L2_037_047G1_scaffold_111_19
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22169..23245)
DNA (1077bp) protein (359aa)
outer membrane phosphoporin protein E n=1 Tax=Citrobacter freundii RepID=UPI0002E79546
Outer membrane protein F {ECO:0000313|EMBL:EOQ50552.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
ompF; outer membrane protein F
L2_037_047G1_scaffold_111_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23851..25251)
DNA (1401bp) protein (467aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Asparagine--tRNA ligase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBT3_9ENTR
asparaginyl-tRNA synthetase
L2_037_047G1_scaffold_111_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25418..26620)
DNA (1203bp) protein (401aa)
nicotinate phosphoribosyltransferase (EC:6.3.4.21)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Nicotinate phosphoribosyltransferase n=3 Tax=Citrobacter RepID=K8QX86_CITFR
L2_037_047G1_scaffold_111_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26887..29499
DNA (2613bp) protein (871aa)
Membrane alanyl aminopeptidase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBT0_9ENTR
pepN; aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AHY12726.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29571..30338)
DNA (768bp) protein (256aa)
Aliphatic sulfonates import ATP-binding protein SsuB {ECO:0000256|HAMAP-Rule:MF_01724}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01724};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
ABC transporter, ATP-binding protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBS8_9ENTR
ssuB; aliphatic sulfonates transport ATP-binding subunit
L2_037_047G1_scaffold_111_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30335..31126)
DNA (792bp) protein (264aa)
Putative aliphatic sulfonates transport permease protein SsuC n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBS7_9ENTR
ssuC; alkanesulfonate transporter permease subunit
Alkanesulfonate transporter permease subunit {ECO:0000313|EMBL:AHY12728.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31138..32283)
DNA (1146bp) protein (382aa)
alkanesulfonate monooxygenase (EC:1.14.14.5)
Alkanesulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380}; EC=1.14.14.5 {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380};; FMNH2-dependent aliphatic sulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Alkanesulfonate monooxygenase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBS6_9ENTR
L2_037_047G1_scaffold_111_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32280..33254)
DNA (975bp) protein (325aa)
Alkanesulfonate transporter subunit n=1 Tax=Citrobacter sp. KTE32 RepID=R8VFN8_9ENTR
alkanesulfonate transporter substrate-binding subunit
Alkanesulfonate transporter substrate-binding subunit {ECO:0000313|EMBL:AHY12730.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_27
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33247..33822)
DNA (576bp) protein (192aa)
FMN reductase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BBS4_9ENTR
NAD(P)H-dependent FMN reductase
FMN reductase {ECO:0000313|EMBL:GAL44641.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_037_047G1_scaffold_111_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34065..35075
DNA (1011bp) protein (337aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Dihydroorotate dehydrogenase (quinone) n=2 Tax=Citrobacter RepID=R8VF54_9ENTR
dihydroorotate dehydrogenase
L2_037_047G1_scaffold_111_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35241..35783
DNA (543bp) protein (181aa)
Cell division protein ZapC n=8 Tax=Citrobacter RepID=C1M9M3_9ENTR
cell division protein ZapC
Cell division protein ZapC {ECO:0000256|HAMAP-Rule:MF_00906, ECO:0000256|PIRNR:PIRNR010252}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_111_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35780..36886)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HBL8_SHIFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY12734.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Displaying items 1-30 of 50 in total

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