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L2_037_047G1_scaffold_167

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_047G1_scaffold_167_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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673..3792
DNA (3120bp) protein (1040aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Isoleucine--tRNA ligase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMB1_CLOP1
L2_037_047G1_scaffold_167_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3838..4167)
DNA (330bp) protein (110aa)
Rhodanese-like domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CZP5_CLOPF
rhodanese-like domain-containing protein
Rhodanese-like domain protein {ECO:0000313|EMBL:EDT15352.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4499..5497
DNA (999bp) protein (333aa)
Catabolite control protein A n=10 Tax=Clostridium perfringens RepID=H1CVL7_CLOPF
catabolite control protein A
Putative catabolite control protein A {ECO:0000313|EMBL:EDT15334.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5602..6030
DNA (429bp) protein (143aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BSF1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15421.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6034..6726
DNA (693bp) protein (231aa)
Membrane protein n=5 Tax=Clostridium perfringens RepID=Q0TMB5_CLOP1
membrane protein
Membrane protein {ECO:0000313|EMBL:EDT72877.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_037_047G1_scaffold_167_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6839..7471
DNA (633bp) protein (211aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CZP1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15841.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_047G1_scaffold_167_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7660..9027
DNA (1368bp) protein (456aa)
MATE efflux family protein n=8 Tax=Clostridium perfringens RepID=H7CZP0_CLOPF
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:EDT15336.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9067..9246)
DNA (180bp) protein (60aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZN9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15370.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9361..9939
DNA (579bp) protein (193aa)
Spore maturation protein A n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMB9_CLOP1
spore maturation protein A
Spore maturation protein A {ECO:0000313|EMBL:EIA15838.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_047G1_scaffold_167_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9951..10469
DNA (519bp) protein (173aa)
Spore maturation protein B n=3 Tax=Clostridium perfringens RepID=H7CZN7_CLOPF
spore maturation protein B
Spore maturation protein B {ECO:0000313|EMBL:EIA15837.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_047G1_scaffold_167_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10898..13495
DNA (2598bp) protein (866aa)
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase n=8 Tax=Clostridium perfringens RepID=H7CZN6_CLOPF
adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_037_047G1_scaffold_167_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13643..14887
DNA (1245bp) protein (415aa)
pepP; xaa-pro aminopeptidase (EC:3.4.11.9)
Xaa-pro aminopeptidase {ECO:0000313|EMBL:EDT27187.1}; EC=3.4.11.9 {ECO:0000313|EMBL:EDT27187.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Xaa-pro aminopeptidase n=4 Tax=Clostridium perfringens RepID=Q0SQ21_CLOPS
L2_037_047G1_scaffold_167_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14995..15333
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFQ3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27186.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_037_047G1_scaffold_167_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15473..17086
DNA (1614bp) protein (538aa)
ABC1 domain protein n=2 Tax=Clostridium perfringens RepID=Q0TMC4_CLOP1
hypothetical protein
ABC1 domain protein {ECO:0000313|EMBL:EDT15394.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17512..19227
DNA (1716bp) protein (572aa)
Na+/H+ antiporter family protein n=6 Tax=Clostridium perfringens RepID=H7CZN2_CLOPF
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EDT24298.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Na+/H+ antiporter family protein
L2_037_047G1_scaffold_167_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19357..19866)
DNA (510bp) protein (170aa)
Putative membrane protein n=5 Tax=Clostridium perfringens RepID=Q0SQ25_CLOPS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15409.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19901..20482)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CZN0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15830.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_047G1_scaffold_167_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20971..22908
DNA (1938bp) protein (646aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Clostridium perfringens RepID=B1R635_CLOPF
L2_037_047G1_scaffold_167_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23009..24553
DNA (1545bp) protein (515aa)
Methionyl-tRNA synthetase {ECO:0000313|EMBL:EDT24243.1}; EC=6.1.1.10 {ECO:0000313|EMBL:EDT24243.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase n=3 Tax=Clostridium perfringens RepID=H7CZM8_CLOPF
Methionyl-tRNA synthetase suspected. See adjacent gene [L2_037_047G1_scaffold_167_18].
L2_037_047G1_scaffold_167_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24817..25497)
DNA (681bp) protein (227aa)
Cyclic nucleotide-binding domain-containing protein n=8 Tax=Clostridium perfringens RepID=H7CZM7_CLOPF
cyclic nucleotide-binding domain-containing protein
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDT15386.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25599..27098
DNA (1500bp) protein (500aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BSD4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15355.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27117..27887
DNA (771bp) protein (257aa)
Hydrolase, TatD family protein n=7 Tax=Clostridium perfringens RepID=H7CZM5_CLOPF
TatD family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB82226.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_037_047G1_scaffold_167_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28131..29153
DNA (1023bp) protein (341aa)
3D/G5 domain-containing protein n=4 Tax=Clostridium perfringens RepID=H7CZM4_CLOPF
hypothetical protein
3D/G5 domain-containing protein {ECO:0000313|EMBL:EIA15824.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_037_047G1_scaffold_167_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29294..29842
DNA (549bp) protein (183aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Ribonuclease M5 n=7 Tax=Clostridium perfringens RepID=H7CZM3_CLOPF
primase-like protein
L2_037_047G1_scaffold_167_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


29854..30711
DNA (858bp) protein (286aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=3 Tax=Clostridium perfringens RepID=B1BSD0_CLOPF
L2_037_047G1_scaffold_167_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30811..32433
DNA (1623bp) protein (541aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CZM1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15821.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_037_047G1_scaffold_167_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32564..33154
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMD8_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86907.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_037_047G1_scaffold_167_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33257..34027
DNA (771bp) protein (257aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Prolipoprotein diacylglyceryl transferase n=6 Tax=Clostridium perfringens RepID=H7CZL9_CLOPF
L2_037_047G1_scaffold_167_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34017..34856
DNA (840bp) protein (280aa)
Putative lipoprotein n=4 Tax=Clostridium perfringens RepID=H7CZL8_CLOPF
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EDT15375.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_037_047G1_scaffold_167_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34877..35731
DNA (855bp) protein (285aa)
Protein mrp homolog n=10 Tax=Clostridium perfringens RepID=MRP_CLOPE
ATPase
Mrp/NBP35 ATP-binding family protein {ECO:0000313|EMBL:EDT15379.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying items 1-30 of 36 in total

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