ggKbase home page

L2_037_047G1_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_047G1_scaffold_221_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(295..1371)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI00036C8FEE
Uncharacterized protein {ECO:0000313|EMBL:KEH92848.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT12695.;"
L2_037_047G1_scaffold_221_2
unknown

Not on your lists

comp(1464..2195)
DNA (732bp) protein (244aa)

This feature has no annotations

L2_037_047G1_scaffold_221_3
unknown

Not on your lists

comp(2323..2511)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_037_047G1_scaffold_221_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2524..3396)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TRN1_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD22725.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_037_047G1_scaffold_221_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3484..3738)
DNA (255bp) protein (85aa)
Putative transcriptional regulatory protein n=2 Tax=Clostridium botulinum B RepID=B2TRN2_CLOBB
transcriptional regulatory protein
Putative helix-turn-helix DNA binding protein {ECO:0000313|EMBL:CDH91295.1}; Putative transcriptional regulatory protein {ECO:0000313|EMBL:ACD21760.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_037_047G1_scaffold_221_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3818..4651)
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TRN3_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24566.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_037_047G1_scaffold_221_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4729..5220)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TRN4_CLOBB
hypothetical protein
Putative phage protein {ECO:0000313|EMBL:CDH91297.1}; Uncharacterized protein {ECO:0000313|EMBL:ACD24903.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_037_047G1_scaffold_221_8
unknown

Not on your lists

comp(5614..5802)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_037_047G1_scaffold_221_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6533..6952)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M131_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99755.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
restriction endonuclease-like protein
L2_037_047G1_scaffold_221_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7447..8394)
DNA (948bp) protein (316aa)
Phage integrase family protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELR4_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:KIL09760.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
phage integrase family protein
L2_037_047G1_scaffold_221_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8534..9535)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS69_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87436.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
GGGtGRT protein
L2_037_047G1_scaffold_221_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9561..10253)
DNA (693bp) protein (231aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS70_CLOBU
No significant {ECO:0000313|EMBL:KJZ85327.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_037_047G1_scaffold_221_13

Not on your lists

comp(10955..11797)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARH4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ20800.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_037_047G1_scaffold_221_14

Not on your lists

12058..12669
DNA (612bp) protein (204aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6P3_CLOBU
Sigma-70 region 2 protein {ECO:0000313|EMBL:ETJ20801.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sigma-70 region 2 domain-containing protein
L2_037_047G1_scaffold_221_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12765..16799)
DNA (4035bp) protein (1345aa)
Eco57I restriction endonuclease n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW85_9FIRM
Eco57I restriction endonuclease {ECO:0000313|EMBL:EDM99742.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Type II restriction endonuclease
L2_037_047G1_scaffold_221_16
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16811..17731)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LDZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY77363.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L2_037_047G1_scaffold_221_17

Not on your lists

17998..18579
DNA (582bp) protein (194aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6P3_CLOBU
Sigma-70 region 2 protein {ECO:0000313|EMBL:ETJ20801.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RNA polymerase sigma factor, sigma-70 family
L2_037_047G1_scaffold_221_18
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18847..19068
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RPV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC45086.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L2_037_047G1_scaffold_221_19

Not on your lists

comp(19345..19911)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0F00
Uncharacterized protein {ECO:0000313|EMBL:ETJ17566.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_037_047G1_scaffold_221_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19937..21079)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z940_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36270.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metallo beta-lactamase family protein
L2_037_047G1_scaffold_221_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21107..21268)
DNA (162bp) protein (54aa)
Cell wall binding repeat domain protein n=2 Tax=Clostridium butyricum RepID=B1R255_CLOBU
Cell surface protein {ECO:0000313|EMBL:KJZ88399.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_037_047G1_scaffold_221_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21385..21585
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z669_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35366.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_037_047G1_scaffold_221_23
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21654..22484)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M3B4_CLOB8
Uncharacterized protein {ECO:0000313|EMBL:AJG98853.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_037_047G1_scaffold_221_24
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22502..24535)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BEH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70590.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_037_047G1_scaffold_221_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26173..26559)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z5C6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD13980.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L2_037_047G1_scaffold_221_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26662..27000)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z4U1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34911.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_037_047G1_scaffold_221_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27127..27333
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AS81_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD15195.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_037_047G1_scaffold_221_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27730..28191)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEV1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34913.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_037_047G1_scaffold_221_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28371..28526)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQ50_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34914.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_037_047G1_scaffold_221_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28590..28838)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z5C9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34915.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Displaying items 1-30 of 36 in total

View Taxonomy