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L2_037_047G1_scaffold_241

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_047G1_scaffold_241_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..588)
DNA (588bp) protein (196aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=588858 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella typhimurium (strain 14028s / SGSC 2262).;"
Glycine--tRNA ligase alpha subunit n=2 Tax=Salmonella houtenae RepID=H7EEE8_SALHO
glycyl-tRNA synthetase
L2_037_047G1_scaffold_241_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(684..986)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BII1_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY10975.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1159..2154
DNA (996bp) protein (332aa)
O-acetyltransferase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QZZ7_CITFR
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AHY10976.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2683..4137)
DNA (1455bp) protein (485aa)
Xylulokinase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BII4_9ENTR
xylulose kinase
Xylulose kinase {ECO:0000313|EMBL:AHY10978.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4210..5532)
DNA (1323bp) protein (441aa)
xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Xylose isomerase n=6 Tax=Citrobacter RepID=G9SC25_CITFR
L2_037_047G1_scaffold_241_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5891..7069
DNA (1179bp) protein (393aa)
Transcriptional regulator, AraC family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BII7_9ENTR
XylR family transcriptional regulator
XylR family transcriptional regulator {ECO:0000313|EMBL:AHY10980.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7140..7712)
DNA (573bp) protein (191aa)
Protein bax n=6 Tax=Citrobacter RepID=J0LZL8_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY10981.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8090..10120
DNA (2031bp) protein (677aa)
Alpha-amylase n=3 Tax=Citrobacter RepID=J1G3Q1_9ENTR
malS; alpha-amylase
Alpha-amylase {ECO:0000313|EMBL:AHY10982.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_9
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10255..11547
DNA (1293bp) protein (431aa)
avtA; valine--pyruvate aminotransferase (EC:2.6.1.66)
Valine-pyruvate transaminase n=3 Tax=Citrobacter RepID=J0VSB3_9ENTR
Valine--pyruvate aminotransferase {ECO:0000313|EMBL:GAL46160.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_037_047G1_scaffold_241_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11582..12055)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC20_CITFR
electron transporter
Electron transporter {ECO:0000313|EMBL:AHY10984.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12173..12988)
DNA (816bp) protein (272aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIJ2_9ENTR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHY10985.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13206..14204
DNA (999bp) protein (333aa)
2,3-diketo-L-gulonate reductase (EC:1.1.1.130)
2,3-diketo-L-gulonate reductase {ECO:0000256|HAMAP-Rule:MF_00820}; Short=2,3-DKG reductase {ECO:0000256|HAMAP-Rule:MF_00820};; EC=1.1.1.130 {ECO:0000256|HAMAP-Rule:MF_00820};; 3-dehydro-L-gulonate 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00820}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
2,3-diketo-L-gulonate reductase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIJ3_9ENTR
L2_037_047G1_scaffold_241_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14216..14680
DNA (465bp) protein (155aa)
Protein yiaL n=1 Tax=Citrobacter sp. KTE151 RepID=R8WKL8_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY10987.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14694..15626
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIJ5_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY10988.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15658..16977
DNA (1320bp) protein (440aa)
Major facilitator family transporter n=3 Tax=Citrobacter RepID=K8QRV5_CITFR
2-ketogluconate transporter
2-ketogluconate transporter {ECO:0000313|EMBL:AHY10989.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17078..18580
DNA (1503bp) protein (501aa)
Carbohydrate kinase, FGGY family protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIJ7_9ENTR
xylulose kinase
Xylulose kinase {ECO:0000313|EMBL:AHY10990.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18580..19242
DNA (663bp) protein (221aa)
sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase (EC:4.1.1.85)
3-keto-L-gulonate-6-phosphate decarboxylase {ECO:0000313|EMBL:AHY10991.1}; EC=4.1.1.85 {ECO:0000313|EMBL:AHY10991.1};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
3-keto-L-gulonate-6-phosphate decarboxylase sgbH n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC13_CITFR
L2_037_047G1_scaffold_241_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19235..20095
DNA (861bp) protein (287aa)
Putative hexulose-6-phosphate isomerase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIJ9_9ENTR
xylulose 5-phosphate 3-epimerase
Xylulose 5-phosphate 3-epimerase {ECO:0000313|EMBL:AHY10992.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20089..20784
DNA (696bp) protein (232aa)
araD; ribulose 5-phosphate epimerase (EC:5.1.3.4)
Ribulose 5-phosphate epimerase {ECO:0000313|EMBL:AHY10993.1}; EC=5.1.3.4 {ECO:0000313|EMBL:AHY10993.1};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIK0_9ENTR
L2_037_047G1_scaffold_241_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20789..21604)
DNA (816bp) protein (272aa)
Transcriptional regulator, AraC family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIK1_9ENTR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHY10994.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21856..23256
DNA (1401bp) protein (467aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=3 Tax=Citrobacter RepID=K8QTM4_CITFR
permease
Permease {ECO:0000313|EMBL:AHY10995.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23267..25222
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIK4_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY10996.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25310..26050)
DNA (741bp) protein (247aa)
Outer membrane protein n=2 Tax=Citrobacter RepID=R8V1M2_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY10997.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_24
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26172..27122
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC06_CITFR
Putative LysR family transcriptional regulator YiaU {ECO:0000313|EMBL:GAL46141.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
LysR family transcriptional regulator
L2_037_047G1_scaffold_241_25
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27139..28275)
DNA (1137bp) protein (379aa)
Auxiliary transport protein, membrane fusion protein (MFP) family protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIK7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL46140.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
membrane protein
L2_037_047G1_scaffold_241_26
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28281..28604)
DNA (324bp) protein (108aa)
Inner membrane protein yiaW n=6 Tax=Citrobacter RepID=G9SC04_CITFR
Uncharacterized protein {ECO:0000313|EMBL:GAL46139.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
membrane protein
L2_037_047G1_scaffold_241_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28938..30476)
DNA (1539bp) protein (513aa)
Aldehyde dehydrogenase B n=4 Tax=Enterobacteriaceae RepID=I6HIH2_SHIFL
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHY11000.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
aldehyde dehydrogenase
L2_037_047G1_scaffold_241_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30569..31720)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MDQ0_9ENTR
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AHY11001.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_047G1_scaffold_241_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31906..33753)
DNA (1848bp) protein (616aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIL1_9ENTR
Selenocysteinyl-tRNA-specific translation factor {ECO:0000313|EMBL:AHY11002.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
selenocysteinyl-tRNA-specific translation factor
L2_037_047G1_scaffold_241_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33750..35141)
DNA (1392bp) protein (464aa)
selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIL2_9ENTR
Displaying items 1-30 of 35 in total

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