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L2_037_047G1_scaffold_388

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_047G1_scaffold_388_1
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1..105)
DNA (105bp) protein (35aa)
Translation initiation factor IF-3 n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIF5_9FIRM
Translation initiation factor IF-3 {ECO:0000256|RuleBase:RU000646}; Flags: Fragment;; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
translation initiation factor IF-3
L2_037_047G1_scaffold_388_2
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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506..2107
DNA (1602bp) protein (534aa)
Anion transporter family protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIF6_9FIRM
Anion transporter family protein {ECO:0000313|EMBL:EFG23903.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
anion transporter
L2_037_047G1_scaffold_388_3
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2267..2908)
DNA (642bp) protein (214aa)
Putative transcriptional regulator, MarR family n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIF7_9FIRM
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:EFG23904.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
MarR family transcriptional regulator
L2_037_047G1_scaffold_388_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3635..4840)
DNA (1206bp) protein (402aa)
Major facilitator superfamily (MFS) transportprotein n=1 Tax=Veillonella parvula HSIVP1 RepID=T0U7K2_9FIRM
Major facilitator superfamily (MFS) transportprotein {ECO:0000313|EMBL:EQC65864.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
major facilitator superfamily protein
L2_037_047G1_scaffold_388_5
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4996..6906)
DNA (1911bp) protein (637aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
Threonine--tRNA ligase n=2 Tax=Veillonella sp. 6_1_27 RepID=D6KNK8_9FIRM
threonyl-tRNA synthetase
L2_037_047G1_scaffold_388_6
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(7520..8509)
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KNK9_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFG25686.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
hypothetical protein
L2_037_047G1_scaffold_388_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8611..8886)
DNA (276bp) protein (92aa)
UPI0003D5D75A related cluster n=1 Tax=unknown RepID=UPI0003D5D75A
Uncharacterized protein {ECO:0000313|EMBL:ETI97084.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L2_037_047G1_scaffold_388_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(8890..10134)
DNA (1245bp) protein (415aa)
Peptidase, U32 family {ECO:0000313|EMBL:EGL77774.1}; EC=3.4.-.- {ECO:0000313|EMBL:EGL77774.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Peptidase, U32 family n=2 Tax=Veillonella parvula RepID=D1YRZ7_9FIRM
peptidase U32
L2_037_047G1_scaffold_388_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10134..10742)
DNA (609bp) protein (203aa)
O-methyltransferase {ECO:0000313|EMBL:EGL77770.1}; EC=2.1.1.- {ECO:0000313|EMBL:EGL77770.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
O-methyltransferase family protein n=2 Tax=Veillonella RepID=D6KNL2_9FIRM
O-methyltransferase family protein
L2_037_047G1_scaffold_388_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10766..12199)
DNA (1434bp) protein (478aa)
UPI0003D5A474 related cluster n=2 Tax=unknown RepID=UPI0003D5A474
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ETI97087.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
aminodeoxychorismate lyase
L2_037_047G1_scaffold_388_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12443..12739)
DNA (297bp) protein (99aa)
Uncharacterized protein n=3 Tax=Veillonella RepID=T0T426_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI97088.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L2_037_047G1_scaffold_388_12
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12766..13185)
DNA (420bp) protein (140aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
Putative Holliday junction resolvase n=5 Tax=Veillonella RepID=D1BNA2_VEIPT
Holliday junction resolvase YqgF
L2_037_047G1_scaffold_388_13
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(13185..13445)
DNA (261bp) protein (87aa)
UPF0297 protein Vpar_1180 n=6 Tax=Veillonella RepID=D1BNA3_VEIPT
hypothetical protein
UPF0297 protein HMPREF0874_00547 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
L2_037_047G1_scaffold_388_14
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(13600..16215)
DNA (2616bp) protein (872aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Alanine--tRNA ligase n=2 Tax=Veillonella sp. 3_1_44 RepID=D6KIG8_9FIRM
alanyl-tRNA synthetase
L2_037_047G1_scaffold_388_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16493..17305)
DNA (813bp) protein (271aa)
NLP/P60 protein n=2 Tax=Veillonella RepID=D1BNA5_VEIPT
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ACZ24862.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L2_037_047G1_scaffold_388_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17390..18400)
DNA (1011bp) protein (337aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB85378.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB85378.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
Glycosyl transferase family 2 n=7 Tax=Veillonella RepID=D1BNA6_VEIPT
family 2 glycosyl transferase
L2_037_047G1_scaffold_388_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18777..19154)
DNA (378bp) protein (126aa)
HupH hydrogenase expression protein, C-terminal conserved region n=2 Tax=Veillonella parvula RepID=D1YS06_9FIRM
HupH hydrogenase expression protein, C-terminal conserved region {ECO:0000313|EMBL:EFB85379.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
hypothetical protein
L2_037_047G1_scaffold_388_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19223..19831)
DNA (609bp) protein (203aa)
Hydrogenase expression/formation protein n=3 Tax=Veillonella RepID=D6KNM1_9FIRM
Hydrogenase maturation protease {ECO:0000313|EMBL:ETI97095.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hydrogenase maturation protease
L2_037_047G1_scaffold_388_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19794..20603)
DNA (810bp) protein (270aa)
Ni/Fe-hydrogenase, b-type cytochrome subunit n=2 Tax=Veillonella RepID=D1BNA9_VEIPT
Ni/Fe-hydrogenase, b-type cytochrome subunit
Ni/Fe-hydrogenase, b-type cytochrome subunit {ECO:0000313|EMBL:ACZ24866.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
L2_037_047G1_scaffold_388_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20618..22519)
DNA (1902bp) protein (634aa)
UPI0003D6146D related cluster n=1 Tax=unknown RepID=UPI0003D6146D
Nickel-iron hydrogenase, large subunit {ECO:0000313|EMBL:ETI97097.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
nickel-dependent hydrogenase large subunit
Displaying 20 items

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