ggKbase home page

L2_037_060G1_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 441 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_060G1_scaffold_7_1
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)
Cold shock protein n=1 Tax=secondary endosymbiont of Ctenarytaina eucalypti RepID=J3Z3H0_9ENTR
cspC; cold shock-like protein CspC
Cold-shock protein {ECO:0000313|EMBL:KFF76544.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_037_060G1_scaffold_7_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(875..1159)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6B5_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY13715.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1542..1781
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6B3_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY13717.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_4
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1896..2687)
DNA (792bp) protein (264aa)
Transcriptional regulator KdgR n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6B2_9ENTR
Transcriptional regulator KdgR {ECO:0000313|EMBL:EFE10571.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
transcriptional regulator
L2_037_060G1_scaffold_7_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2862..4235
DNA (1374bp) protein (458aa)
Transporter, major facilitator family protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6B1_9ENTR
multidrug MFS transporter
Multidrug MFS transporter {ECO:0000313|EMBL:AHY13719.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4282..5163)
DNA (882bp) protein (294aa)
Protease HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Heat shock protein HtpX {ECO:0000256|HAMAP-Rule:MF_00188}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Protease HtpX n=11 Tax=Citrobacter RepID=C1M5K4_9ENTR
heat shock protein HtpX
L2_037_060G1_scaffold_7_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5356..7404)
DNA (2049bp) protein (683aa)
carboxy-terminal protease (EC:3.4.21.102)
Carboxy-terminal protease {ECO:0000313|EMBL:AHY13721.1}; EC=3.4.21.102 {ECO:0000313|EMBL:AHY13721.1};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Peptidase, S41 family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6A9_9ENTR
L2_037_060G1_scaffold_7_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7424..8110)
DNA (687bp) protein (229aa)
ProP effector n=4 Tax=Citrobacter RepID=C1M5K6_9ENTR
prop expression regulator
RNA chaperone ProQ {ECO:0000256|HAMAP-Rule:MF_00749, ECO:0000256|SAAS:SAAS00012015}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_037_060G1_scaffold_7_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8207..8704)
DNA (498bp) protein (166aa)
GAF domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6A7_9ENTR
Free methionine-R-sulfoxide reductase
Free methionine-R-sulfoxide reductase {ECO:0000313|EMBL:AHY13723.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8833..10116
DNA (1284bp) protein (428aa)
Inner membrane protein yebS n=3 Tax=Citrobacter RepID=J1G1Y9_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY13724.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10085..12718
DNA (2634bp) protein (878aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6A4_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY13725.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_12
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12798..14219
DNA (1422bp) protein (474aa)
Ribosomal RNA small subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01579}; EC=2.1.1.178 {ECO:0000256|HAMAP-Rule:MF_01579};; 16S rRNA m5C1407 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01579}; rRNA (cytosine-C(5)-)-methyltransferase RsmF {ECO:0000256|HAMAP-Rule:MF_01579}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Ribosomal RNA small subunit methyltransferase F n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SKK8_CITFR
yebU; RNA methyltransferase RsmF
L2_037_060G1_scaffold_7_13
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14317..14556
DNA (240bp) protein (80aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=D4B6A2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EFE10561.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
hypothetical protein
L2_037_060G1_scaffold_7_14
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14679..14870
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6A1_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE10560.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
L2_037_060G1_scaffold_7_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14871..15512)
DNA (642bp) protein (214aa)
Serine/threonine-protein phosphatase 1 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B6A0_9ENTR
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AHY13729.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15586..16866)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Citrobacter freundii RepID=UPI0002F34A3E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY13730.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17448..17786)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B696_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY13789.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17807..18679)
DNA (873bp) protein (291aa)
Inner membrane protein YebZ n=1 Tax=Citrobacter sp. 30_2 RepID=C1M5L5_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY13790.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18683..19057)
DNA (375bp) protein (125aa)
Copper resistance protein CopC n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B694_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY13791.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_20
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19201..19431
DNA (231bp) protein (77aa)
DNA polymerase III subunit theta n=9 Tax=Citrobacter RepID=C1M5L7_9ENTR
DNA polymerase III subunit theta
DNA polymerase III subunit theta {ECO:0000313|EMBL:GAL43693.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_037_060G1_scaffold_7_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19538..20194
DNA (657bp) protein (219aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B692_9ENTR
carbon-nitrogen hydrolase
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:AHY13793.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20217..20879
DNA (663bp) protein (221aa)
Exodeoxyribonuclease 10 n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B691_9ENTR
exodeoxyribonuclease X
Exodeoxyribonuclease X {ECO:0000313|EMBL:AHY13794.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20861..22960)
DNA (2100bp) protein (700aa)
protease 2 (EC:3.4.21.83)
Protease 2 {ECO:0000313|EMBL:AHY13795.1}; EC=3.4.21.83 {ECO:0000313|EMBL:AHY13795.1};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B690_9ENTR
L2_037_060G1_scaffold_7_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23023..23682)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B689_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY13796.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23777..24130)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B688_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY13797.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_7_26
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24252..24542)
DNA (291bp) protein (97aa)
DNA damage-inducible protein Y n=3 Tax=Citrobacter RepID=R8VGE6_9ENTR
damage-inducible protein YebG
Damage-inducible protein YebG {ECO:0000313|EMBL:KKC61183.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L2_037_060G1_scaffold_7_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24675..25853
DNA (1179bp) protein (393aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SKM2_CITFR
phosphoribosylglycinamide formyltransferase
L2_037_060G1_scaffold_7_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25922..26563)
DNA (642bp) protein (214aa)
keto-deoxy-phosphogluconate aldolase (EC:4.1.2.14 4.1.3.16)
Keto-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:AHY13800.1}; EC=4.1.2.14 {ECO:0000313|EMBL:AHY13800.1};; EC=4.1.3.16 {ECO:0000313|EMBL:AHY13800.1};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
KHG/KDPG aldolase n=8 Tax=Citrobacter RepID=C1M5M5_9ENTR
L2_037_060G1_scaffold_7_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26598..28409)
DNA (1812bp) protein (604aa)
phosphogluconate dehydratase (EC:4.2.1.12)
Phosphogluconate dehydratase {ECO:0000313|EMBL:AHY13801.1}; EC=4.2.1.12 {ECO:0000313|EMBL:AHY13801.1};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Phosphogluconate dehydratase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4B684_9ENTR
L2_037_060G1_scaffold_7_30
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28644..30119)
DNA (1476bp) protein (492aa)
glucose-6-phosphate dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Glucose-6-phosphate 1-dehydrogenase n=8 Tax=Citrobacter RepID=J1FYF8_9ENTR
Displaying items 1-30 of 441 in total

View Taxonomy