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L2_037_060G1_scaffold_332

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_060G1_scaffold_332_1
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(129..677)
DNA (549bp) protein (183aa)
Ribosome maturation factor RimM n=10 Tax=Citrobacter RepID=C1MA90_9ENTR
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
L2_037_060G1_scaffold_332_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(696..944)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=12 Tax=Enterobacteriaceae RepID=D4BHQ5_9ENTR
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_037_060G1_scaffold_332_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1196..2557)
DNA (1362bp) protein (454aa)
Signal recognition particle protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BHQ4_9ENTR
signal recognition particle
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_332_4
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2649..3515
DNA (867bp) protein (289aa)
CorE n=1 Tax=Salmonella typhimurium RepID=Q9X619_SALTM
Magnesium transport protein {ECO:0000313|EMBL:CDZ85460.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
ypjD; hypothetical protein
L2_037_060G1_scaffold_332_5
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3534..4823
DNA (1290bp) protein (430aa)
UPF0053 inner membrane protein yfjD n=4 Tax=Citrobacter RepID=J0LS47_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL47084.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
hypothetical protein
L2_037_060G1_scaffold_332_6
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4873..5466)
DNA (594bp) protein (198aa)
Protein GrpE n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SAP8_CITFR
heat shock protein GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_037_060G1_scaffold_332_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5589..6467
DNA (879bp) protein (293aa)
ppnK; inorganic polyphosphate kinase (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BHQ0_9ENTR
L2_037_060G1_scaffold_332_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6553..8214
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SAP6_CITFR
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
recombination and repair protein
L2_037_060G1_scaffold_332_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8364..8708
DNA (345bp) protein (115aa)
Outer membrane protein assembly factor BamE n=6 Tax=Enterobacteriaceae RepID=G9SAP5_CITFR
membrane biogenesis protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L2_037_060G1_scaffold_332_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8759..9055)
DNA (297bp) protein (99aa)
Protein RnfH 2 n=5 Tax=Enterobacteriaceae RepID=I6GYH4_SHIFL
hypothetical protein
UPF0125 protein CFNIH1_24485 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_332_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9039..9482)
DNA (444bp) protein (148aa)
Polyketide cyclase/dehydrase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BHP6_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY14576.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_332_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9637..10119
DNA (483bp) protein (161aa)
SsrA-binding protein n=13 Tax=Enterobacteriaceae RepID=C1MAA1_9ENTR
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_332_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10688..21919
DNA (11232bp) protein (3744aa)
large repetitive protein n=1 Tax=Citrobacter freundii RepID=UPI000316BDC6
large repetitive protein
Large repetitive protein {ECO:0000313|EMBL:KKC62199.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L2_037_060G1_scaffold_332_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21991..23400
DNA (1410bp) protein (470aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BHP3_9ENTR
type I secretion protein TolC
Type I secretion protein TolC {ECO:0000313|EMBL:AHY14579.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_332_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23397..25583
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V704_9ENTR
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:AHY14580.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_060G1_scaffold_332_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25564..26754
DNA (1191bp) protein (397aa)
HlyD family type I secretion membrane fusion protein n=6 Tax=Citrobacter RepID=C1MAA5_9ENTR
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AHY14581.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Displaying 16 items

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