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L2_037_240G1_scaffold_2102

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_2102_1
unknown

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156..251
DNA (96bp) protein (32aa)

This feature has no annotations

L2_037_240G1_scaffold_2102_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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297..1154
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40209.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_2102_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1255..1467
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71845.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_2102_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1550..2083
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71844.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_2102_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2109..2459
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71843.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_2102_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2475..3371
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71841.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_240G1_scaffold_2102_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3372..3803
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40205.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_2102_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4131..4358
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71838.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_2102_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4392..4886
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71831.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_2102_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4942..5556
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71830.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_2102_11
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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5563..5898
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40201.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_2102_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5921..6556
DNA (636bp) protein (212aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71828.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_240G1_scaffold_2102_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6581..6814
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71826.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_2102_14
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6956..8173)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M4F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65840.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
DNA integration/recombination/inversion protein
L2_037_240G1_scaffold_2102_15
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8265..8471)
DNA (207bp) protein (69aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M465_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EOS65839.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
xis2; putative excisionase
L2_037_240G1_scaffold_2102_16
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8468..9019)
DNA (552bp) protein (184aa)
Growth inhibitor n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JDI7_9FIRM
Growth inhibitor
Growth inhibitor {ECO:0000313|EMBL:CBK88259.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L2_037_240G1_scaffold_2102_17
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9643..10092)
DNA (450bp) protein (150aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Firmicutes RepID=H1BDT0_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CDC79577.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
hypothetical protein
L2_037_240G1_scaffold_2102_18
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10664..11077)
DNA (414bp) protein (138aa)
Transcriptional regulatory protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DD51_CLOS4
Transcriptional regulatory protein {ECO:0000313|EMBL:ERJ00750.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
transcriptional regulatory protein
L2_037_240G1_scaffold_2102_19
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11074..11469)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UHB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGG86856.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Mn-dependent transcriptional regulator
L2_037_240G1_scaffold_2102_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11490..12323)
DNA (834bp) protein (278aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AJD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75075.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ABC-type multidrug transport system, ATPase and permease components
Displaying 20 items

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