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L2_037_240G1_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 322 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_5_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

145..396
DNA (252bp) protein (84aa)
Uncharacterized protein n=6 Tax=Bifidobacterium bifidum RepID=I3WKI1_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI44105.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_037_240G1_scaffold_5_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(531..1310)
DNA (780bp) protein (260aa)
NADPH-dependent oxidoreductase n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M569_BIFBI
NADPH-dependent oxidoreductase {ECO:0000313|EMBL:EKF16160.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
nfrA; NADPH-dependent oxidoreductase
L2_037_240G1_scaffold_5_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1569..2021)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKH9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL05392.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_037_240G1_scaffold_5_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2070..2759
DNA (690bp) protein (230aa)
Phosphoglycerate mutase family protein n=5 Tax=Bifidobacterium RepID=E3ERE4_BIFBS
phoE; putative phosphoglycerate mutase
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ADO53948.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_037_240G1_scaffold_5_5
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3060..4082)
DNA (1023bp) protein (341aa)
HTH-type transcriptional regulator n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GQ66_9BIFI
HTH-type transcriptional regulator {ECO:0000313|EMBL:CDB23416.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
LacI-type transcriptional regulator
L2_037_240G1_scaffold_5_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4415..6547
DNA (2133bp) protein (711aa)
alkaline phosphatase n=1 Tax=Bifidobacterium bifidum RepID=UPI0001976FEA
Alkaline phosphatase {ECO:0000313|EMBL:BAQ98995.1}; Alkaline phosphatase family protein {ECO:0000313|EMBL:ERI82790.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
alkaline phosphatase
L2_037_240G1_scaffold_5_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6925..8808
DNA (1884bp) protein (628aa)
Chaperone protein DnaK n=7 Tax=Bifidobacterium bifidum RepID=E3ERE0_BIFBS
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
dnaK; chaperone protein dnaK
L2_037_240G1_scaffold_5_8
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8811..9515
DNA (705bp) protein (235aa)
Protein GrpE n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCZ1_9BIFI
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
grpE; molecular chaperone GrpE
L2_037_240G1_scaffold_5_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9934..10941
DNA (1008bp) protein (336aa)
DnaJ domain protein n=4 Tax=Bifidobacterium bifidum RepID=E4VAZ8_BIFBI
dnaJ1; chaperone protein dnaJ
Chaperone protein dnaJ {ECO:0000313|EMBL:EKF15027.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_037_240G1_scaffold_5_10
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11036..11548
DNA (513bp) protein (171aa)
Heat shock regulatory protein hspR n=5 Tax=Bifidobacterium RepID=E3ERD6_BIFBS
hspR; putative heat shock protein
HspR heat shock response regulator {ECO:0000313|EMBL:CDB22227.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_037_240G1_scaffold_5_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11906..14410
DNA (2505bp) protein (835aa)
exo-alpha-sialidase (EC:3.2.1.18)
BNR/Asp-box repeat protein n=2 Tax=Bifidobacterium bifidum RepID=E4VB00_BIFBI
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EFR50765.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_037_240G1_scaffold_5_12
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14722..20070
DNA (5349bp) protein (1783aa)
exo-alpha-sialidase (EC:3.2.1.18)
Exo-alpha-sialidase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GKU0_9BIFI
Exo-alpha-sialidase {ECO:0000313|EMBL:CDB22229.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_037_240G1_scaffold_5_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20386..21102
DNA (717bp) protein (239aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=K2I836_BIFBI
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERI82780.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ98985.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_037_240G1_scaffold_5_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21597..22295)
DNA (699bp) protein (233aa)
DedA integral membrane protein n=2 Tax=Bifidobacterium RepID=K2MC78_BIFBI
hypothetical protein
DedA integral membrane protein {ECO:0000313|EMBL:EKF14892.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_037_240G1_scaffold_5_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22565..23566
DNA (1002bp) protein (334aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
S-adenosylmethionine-dependent methyltransferase, YraL family n=3 Tax=Bifidobacterium bifidum RepID=E4VB05_BIFBI
uroporphyrin-III C/tetrapyrrole
L2_037_240G1_scaffold_5_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23568..23999)
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=E4VB06_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI44088.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_037_240G1_scaffold_5_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24110..24940)
DNA (831bp) protein (277aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=I3WKG3_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL05376.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_037_240G1_scaffold_5_18
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24937..25995)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VB08_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC84925.1}; TaxID=552531 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. lactis (strain BB-12).;"
L2_037_240G1_scaffold_5_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26000..26836
DNA (837bp) protein (279aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Methionine--tRNA ligase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I845_BIFBI
L2_037_240G1_scaffold_5_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27031..27525
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQP7_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53931.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_037_240G1_scaffold_5_21
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28292..28441)
DNA (150bp) protein (50aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=E4VB11_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB22237.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_037_240G1_scaffold_5_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28579..30189
DNA (1611bp) protein (537aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EQP5_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53929.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_037_240G1_scaffold_5_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30365..31324
DNA (960bp) protein (320aa)
Sec-independent protein n=2 Tax=Bifidobacterium bifidum RepID=I3WKF7_BIFBI
tadD; sec-independent protein
Sec-independent protein {ECO:0000313|EMBL:AFL05370.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_037_240G1_scaffold_5_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31487..33949
DNA (2463bp) protein (821aa)
Probable potassium transport system protein kup n=2 Tax=Bifidobacterium bifidum RepID=E4P0E8_BIFBP
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
K+ transporter
L2_037_240G1_scaffold_5_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34515..35111
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2MVB0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF15978.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_037_240G1_scaffold_5_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35169..36035
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E3EQP1_BIFBS
putative glutamine amido transferase
Putative glutamine amido transferase {ECO:0000313|EMBL:AFL05367.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_037_240G1_scaffold_5_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36239..36985
DNA (747bp) protein (249aa)
Metal dependent phosphohydrolase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WKF3_BIFBI
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AFL05366.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L2_037_240G1_scaffold_5_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37063..38382)
DNA (1320bp) protein (440aa)
sugar ABC transporter (EC:3.6.3.17)
ABC-type sugar transport system n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0E5_BIFBP
Sugar ABC transporter {ECO:0000313|EMBL:EKF15975.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L2_037_240G1_scaffold_5_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38379..39812)
DNA (1434bp) protein (478aa)
SalY-type ABC antimicrobial peptide transportsystem permease component n=2 Tax=Bifidobacterium bifidum RepID=K2I864_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI44078.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
SalY-type ABC antimicrobial peptide transportsystem permease component
L2_037_240G1_scaffold_5_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40293..42458
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VB21_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50786.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
methyl-accepting chemotaxis protein
Displaying items 1-30 of 322 in total

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