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L2_037_240G1_scaffold_43

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Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_43_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..252
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63699.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Resolvase domain
L2_037_240G1_scaffold_43_2
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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755..1501
DNA (747bp) protein (249aa)
Protein involved in cell division n=1 Tax=Clostridium termitidis CT1112 RepID=S0FVF9_9CLOT
Cell filamentation protein Fic-related protein {ECO:0000313|EMBL:KJR46307.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein
L2_037_240G1_scaffold_43_3
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1875..2564
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HDX0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK83103.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L2_037_240G1_scaffold_43_4
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2566..3642
DNA (1077bp) protein (359aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=L3VSG7_ECOLX
ATPase domain-containing protein
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:ACK52913.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
L2_037_240G1_scaffold_43_5
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4051..4713
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y2Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL02432.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L2_037_240G1_scaffold_43_6
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4710..5699
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y401_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL02431.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L2_037_240G1_scaffold_43_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6332..7309
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXD7_9FIRM
Choloylglycine hydrolase {ECO:0000313|EMBL:KJF38755.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
penicillin V acylase
L2_037_240G1_scaffold_43_8
unknown

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7335..7484
DNA (150bp) protein (50aa)

This feature has no annotations

L2_037_240G1_scaffold_43_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7438..8565
DNA (1128bp) protein (376aa)
Anaerobic sulfatase maturase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXD8_9FIRM
Sulfatase maturase {ECO:0000313|EMBL:KJF38754.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L2_037_240G1_scaffold_43_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8928..10535
DNA (1608bp) protein (536aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXD9_9FIRM
Amidohydrolase {ECO:0000313|EMBL:KJF38753.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
amidohydrolase family protein
L2_037_240G1_scaffold_43_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10668..11369
DNA (702bp) protein (234aa)
RNA polymerase sigma factor n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC67_9CLOT
sigK; RNA polymerase sigma-K factor (sporulation-specific)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_240G1_scaffold_43_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11692..13023
DNA (1332bp) protein (444aa)
Uracil-xanthine permease n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXG1_9FIRM
Uracil-xanthine permease {ECO:0000313|EMBL:EHL65902.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
uracil-xanthine permease
L2_037_240G1_scaffold_43_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13109..14446)
DNA (1338bp) protein (446aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Argininosuccinate lyase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXG2_9FIRM
argH; argininosuccinate lyase
L2_037_240G1_scaffold_43_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14506..15657)
DNA (1152bp) protein (384aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXG3_9FIRM
L2_037_240G1_scaffold_43_15
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15927..16778
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39540.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_037_240G1_scaffold_43_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16800..17585
DNA (786bp) protein (262aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39581.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Polar amino acid transport system permease
L2_037_240G1_scaffold_43_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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17572..18294
DNA (723bp) protein (241aa)
Polar amino acid transport system ATP-binding protein (EC:3.6.3.21)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65752.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_43_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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18380..19621
DNA (1242bp) protein (414aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
argG; Argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXG9_9FIRM
L2_037_240G1_scaffold_43_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19629..20399
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65754.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
N-Dimethylarginine dimethylaminohydrolase
L2_037_240G1_scaffold_43_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20528..21982)
DNA (1455bp) protein (485aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH1_9FIRM
Glucuronide permease {ECO:0000313|EMBL:KJF39536.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
uidB; glucuronide permease
L2_037_240G1_scaffold_43_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22493..23641
DNA (1149bp) protein (383aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH2_9FIRM
L-1,2-propanediol oxidoreductase {ECO:0000313|EMBL:KJF39535.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_43_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23833..24489
DNA (657bp) protein (219aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Probable transaldolase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH3_9FIRM
transaldolase
L2_037_240G1_scaffold_43_23
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24659..25756
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39533.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_43_24
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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25899..28511
DNA (2613bp) protein (871aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Heavy metal translocating P-type ATPase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH5_9FIRM
Copper-binding protein {ECO:0000313|EMBL:KJF39532.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_43_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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28515..28787
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65760.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_240G1_scaffold_43_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28791..29909
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65761.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_240G1_scaffold_43_27
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29951..30691
DNA (741bp) protein (247aa)
Transcriptional regulator, TetR family n=2 Tax=Oscillibacter RepID=U2Q3G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39530.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
putative TetR family transcriptional regulator
L2_037_240G1_scaffold_43_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30966..32189
DNA (1224bp) protein (408aa)
Transporter, major facilitator family protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MBB3_9FIRM
Permease {ECO:0000313|EMBL:KJF39529.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
major facilitator superfamily transporter
L2_037_240G1_scaffold_43_29
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32296..33039
DNA (744bp) protein (248aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF39528.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_43_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33150..33788)
DNA (639bp) protein (213aa)
Thymidine kinase {ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|RuleBase:RU000544};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH8_9FIRM
Displaying items 1-30 of 106 in total

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