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L2_037_240G1_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_45_1
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

738..1043
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83609.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_037_240G1_scaffold_45_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1173..1697
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23527.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
cytoplasmic protein
L2_037_240G1_scaffold_45_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1694..2020
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83607.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_037_240G1_scaffold_45_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2067..3008
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23529.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Domain of unknown function (DUF1848).
L2_037_240G1_scaffold_45_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3033..4991
DNA (1959bp) protein (653aa)
Pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Clostridium RepID=R6PJ41_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDC23530.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L2_037_240G1_scaffold_45_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4985..6757
DNA (1773bp) protein (591aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23531.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_037_240G1_scaffold_45_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6941..7585
DNA (645bp) protein (215aa)
4Fe-4S binding domain protein n=2 Tax=Clostridium RepID=B6FK27_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23532.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
(4Fe-4S)-binding protein
L2_037_240G1_scaffold_45_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7539..8501
DNA (963bp) protein (321aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PGS7_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA83637.1}; Flags: Fragment;; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
osmoprotectant ABC transporter substrate-binding/permease
L2_037_240G1_scaffold_45_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8498..8809
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23534.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC-type transport system, glycinebetaine/carnitine/choline permease
L2_037_240G1_scaffold_45_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8821..9615
DNA (795bp) protein (265aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FK23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23535.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glycine/betaine ABC transporter ATP-binding protein
L2_037_240G1_scaffold_45_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9752..10291
DNA (540bp) protein (180aa)
Rubrerythrin n=2 Tax=Clostridium RepID=B6FK22_9CLOT
Rubrerythrin {ECO:0000313|EMBL:EEA83634.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Rubrerythrin
L2_037_240G1_scaffold_45_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10483..11919
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
adenylosuccinate lyase (EC:4.3.2.2)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6QNN6_9CLOT
L2_037_240G1_scaffold_45_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11934..13211
DNA (1278bp) protein (426aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
purA; adenylosuccinate synthetase PurA (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Clostridium RepID=B6FK20_9CLOT
L2_037_240G1_scaffold_45_14
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13324..14790
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PS42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23539.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Fe-S oxidoreductase
L2_037_240G1_scaffold_45_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14981..16039
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23540.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_037_240G1_scaffold_45_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16066..18243)
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23541.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain
L2_037_240G1_scaffold_45_17
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18248..20773)
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QNP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23542.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain
L2_037_240G1_scaffold_45_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20970..21563
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium RepID=B6FK15_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEA83627.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator, TetR family
L2_037_240G1_scaffold_45_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21765..22601
DNA (837bp) protein (279aa)
Transcription antiterminator LicT n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK14_9CLOT
Transcription antiterminator LicT {ECO:0000313|EMBL:EEA83626.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Beta-glucoside bgl operon antiterminator, BglG family
L2_037_240G1_scaffold_45_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22672..24630
DNA (1959bp) protein (653aa)
PTS system, beta-glucoside-specific, IIABC component {ECO:0000313|EMBL:EEA83625.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEA83625.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
PTS system, beta-glucoside-specific, IIABC component n=2 Tax=Clostridium RepID=B6FK13_9CLOT
PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.5)
L2_037_240G1_scaffold_45_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24653..26104
DNA (1452bp) protein (484aa)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PYN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23546.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_037_240G1_scaffold_45_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26496..27872
DNA (1377bp) protein (459aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Pyridoxal-phosphate dependent TrpB-like enzyme n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK10_9CLOT
L2_037_240G1_scaffold_45_23
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27914..28135)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23548.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted transcriptional regulator
L2_037_240G1_scaffold_45_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28264..30549
DNA (2286bp) protein (762aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PS51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23549.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Two-component sensor histidine kinase
L2_037_240G1_scaffold_45_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30524..30691
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FK07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23550.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
winged helix family two component transcriptional regulator
L2_037_240G1_scaffold_45_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30812..32125
DNA (1314bp) protein (438aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PYN9_9CLOT
Putative permease {ECO:0000313|EMBL:EEA83618.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
uracil-xanthine permease
L2_037_240G1_scaffold_45_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32262..34289
DNA (2028bp) protein (676aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK05_9CLOT
L2_037_240G1_scaffold_45_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34310..35290
DNA (981bp) protein (327aa)
Lysophospholipase (EC:3.1.1.5)
Hydrolase, alpha/beta domain protein n=2 Tax=Clostridium RepID=B6FK04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23553.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_037_240G1_scaffold_45_29
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35310..36359
DNA (1050bp) protein (350aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium nexile CAG:348 RepID=R6PS53_9CLOT
L2_037_240G1_scaffold_45_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36466..37692
DNA (1227bp) protein (409aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FK01_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEA83695.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hydrogenase large subunit domain-containing protein
Displaying items 1-30 of 103 in total

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