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L2_037_240G1_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_92_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPY2_9BIFI
Permease protein of ABC transporter system for sugars, galactan metabolism
ABC transporter permease component {ECO:0000313|EMBL:BAR03192.1}; ABC transporter, permease protein {ECO:0000313|EMBL:EEG71545.1}; Sugar ABC transporter permease component {ECO:0000313|EMBL:BAR04231.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_037_240G1_scaffold_92_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139..2208
DNA (2070bp) protein (690aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Beta-galactosidase n=2 Tax=Bifidobacterium RepID=C0BPY1_9BIFI
beta-galactosidase
L2_037_240G1_scaffold_92_3
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2307..3866)
DNA (1560bp) protein (520aa)
alpha-L-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XX73_9BIFI
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:BAR01430.1}; Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EEB20663.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L2_037_240G1_scaffold_92_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4145..5503
DNA (1359bp) protein (453aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium RepID=C0BPX9_9BIFI
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG71542.1}; Sugar ABC transporter substrate binding component {ECO:0000313|EMBL:BAR03195.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
sugars ABC transporter substrate-binding protein
L2_037_240G1_scaffold_92_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5718..7130
DNA (1413bp) protein (471aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPX8_9BIFI
Sugar ABC transporter substrate binding component {ECO:0000313|EMBL:BAR03196.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ABC transporter substrate-binding protein
L2_037_240G1_scaffold_92_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7241..8014)
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Type III pantothenate kinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPX4_9BIFI
pantothenate kinase
L2_037_240G1_scaffold_92_7
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8073..9356)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUA8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14820.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
phosphopantothenoylcysteine decarboxylase
L2_037_240G1_scaffold_92_8
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9558..11213
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8E3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14821.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
solute binding protein of ABC transporter systemy for peptides
L2_037_240G1_scaffold_92_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11403..12383
DNA (981bp) protein (327aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BPX1_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KEF28636.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
peptide ABC transporter permease
L2_037_240G1_scaffold_92_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12380..13300
DNA (921bp) protein (307aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPX0_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EEG71533.1}; Peptides ABC transporter permease component {ECO:0000313|EMBL:BAR03204.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
peptide ABC transporter permease
L2_037_240G1_scaffold_92_11
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13297..14082
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUB3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14825.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
peptide ABC transporter ATP-binding protein
L2_037_240G1_scaffold_92_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14094..14873
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P8E8_9BIFI
Peptides ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR03206.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
peptide ABC transporter ATP-binding protein
L2_037_240G1_scaffold_92_13
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15313..16323
DNA (1011bp) protein (337aa)
Putative cystathionine beta-synthase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPW7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14827.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
cystathionine beta-synthase
L2_037_240G1_scaffold_92_14
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16403..17584
DNA (1182bp) protein (394aa)
Cys/Met metabolism PLP-dependent enzyme n=2 Tax=Bifidobacterium RepID=C0BPW6_9BIFI
cystathionine gamma-synthase
Cystathionine gamma-synthase {ECO:0000313|EMBL:AIZ14134.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_037_240G1_scaffold_92_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17803..20598
DNA (2796bp) protein (932aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPW4_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG71527.1}; Putative ABC transporter ATP-binding component {ECO:0000313|EMBL:BAR03209.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_037_240G1_scaffold_92_16
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20604..22550
DNA (1947bp) protein (649aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUB9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14830.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ATP-dependent DNA helicase RecQ
L2_037_240G1_scaffold_92_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22639..23202
DNA (564bp) protein (188aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
S-ribosylhomocysteine lyase n=2 Tax=Bifidobacterium RepID=C0BPW2_9BIFI
S-ribosylhomocysteinase
L2_037_240G1_scaffold_92_18
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23310..23846
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XX89_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR01445.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
histone acetyltransferase
L2_037_240G1_scaffold_92_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24044..25471)
DNA (1428bp) protein (476aa)
Amino acid transporter n=2 Tax=Bifidobacterium RepID=C0BPV9_9BIFI
Amino acid transporter {ECO:0000313|EMBL:EEG71522.1}; Putative amino acid transport protein {ECO:0000313|EMBL:BAR03213.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
amino acid permease
L2_037_240G1_scaffold_92_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25490..27073
DNA (1584bp) protein (528aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Alanine racemase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPV8_9BIFI
alanine racemase
L2_037_240G1_scaffold_92_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27179..29263
DNA (2085bp) protein (695aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
DNA primase n=2 Tax=Bifidobacterium RepID=C0BPV7_9BIFI
DNA primase
L2_037_240G1_scaffold_92_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29624..30817
DNA (1194bp) protein (398aa)
Citrate transporter n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPV6_9BIFI
Citrate transporter {ECO:0000313|EMBL:EEG71519.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
citrate transporter
L2_037_240G1_scaffold_92_23
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30754..30891)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GNG6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18778.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L2_037_240G1_scaffold_92_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31006..31995
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPV5_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF28623.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
integral membrane protein
L2_037_240G1_scaffold_92_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32212..34200
DNA (1989bp) protein (663aa)
Putative translation elongation factor G n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPV4_9BIFI
GTP-binding protein {ECO:0000313|EMBL:KEF28622.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
translation elongation factors
L2_037_240G1_scaffold_92_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34714..35340)
DNA (627bp) protein (209aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPV3_9BIFI
GCN5 family acetyltransferase {ECO:0000313|EMBL:KEF28619.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
acetyltransferase
L2_037_240G1_scaffold_92_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35613..36269
DNA (657bp) protein (219aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPV1_9BIFI
Polar amino acid ABC transporter permease {ECO:0000313|EMBL:KEF28618.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
polar amino acid ABC transporter permease
L2_037_240G1_scaffold_92_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36256..36930
DNA (675bp) protein (225aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BPV0_9BIFI
ABC transporter, permease protein {ECO:0000313|EMBL:EEG71513.1}; Amino acid ABC transporter permease component {ECO:0000313|EMBL:BAR03222.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
amino acid ABC transporter permease
L2_037_240G1_scaffold_92_29
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36923..37759
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVH0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16118.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glutamine ABC transporter ATP-binding protein
L2_037_240G1_scaffold_92_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37841..38749
DNA (909bp) protein (303aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BPU8_9BIFI
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEF28615.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
amino acid ABC transporter substrate-binding protein
Displaying items 1-30 of 69 in total

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