ggKbase home page

L2_037_240G1_scaffold_100

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_100_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106..1866)
DNA (1761bp) protein (587aa)
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=Clostridium RepID=B6FSW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24022.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_037_240G1_scaffold_100_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1921..4062)
DNA (2142bp) protein (714aa)
Export membrane protein SecD n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSW9_9CLOT
Export membrane protein SecD {ECO:0000313|EMBL:EEA80861.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
protein translocase subunit secF/protein translocase subunit secD
L2_037_240G1_scaffold_100_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4066..5469)
DNA (1404bp) protein (468aa)
Six-Cys-in-45 modification radical SAM protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSX0_9CLOT
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EEA80862.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
arylsulfatase regulator (Fe-S oxidoreductase)
L2_037_240G1_scaffold_100_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5596..5739)
DNA (144bp) protein (48aa)
RSAM-modified six-cysteine peptide n=2 Tax=Clostridium RepID=B6FSX2_9CLOT
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:EEA80864.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_037_240G1_scaffold_100_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5834..6208)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80865.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_037_240G1_scaffold_100_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6263..6805)
DNA (543bp) protein (181aa)
Stage V sporulation protein T n=2 Tax=Clostridium RepID=B6FSX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24017.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
AbrB family transcriptional regulator
L2_037_240G1_scaffold_100_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6903..7892)
DNA (990bp) protein (330aa)
Periplasmic binding protein n=2 Tax=Clostridium RepID=B6FSX5_9CLOT
Periplasmic binding protein {ECO:0000313|EMBL:EEA80867.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type enterochelin transport system, periplasmic component
L2_037_240G1_scaffold_100_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7968..8720)
DNA (753bp) protein (251aa)
ABC-type enterochelin transport system, ATPase component (EC:3.6.3.34)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=B6FSX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24015.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_037_240G1_scaffold_100_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8724..9704)
DNA (981bp) protein (327aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridium RepID=B6FSX7_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EEA80869.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type enterochelin transport system, permease component
L2_037_240G1_scaffold_100_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9701..10732)
DNA (1032bp) protein (344aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=2 Tax=Clostridium RepID=B6FSX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24013.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
ABC transporter permease subunit
L2_037_240G1_scaffold_100_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10984..11433
DNA (450bp) protein (150aa)
YqeY-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSX9_9CLOT
YqeY-like protein {ECO:0000313|EMBL:EEA80871.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_037_240G1_scaffold_100_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11460..12788)
DNA (1329bp) protein (443aa)
MATE efflux family protein n=3 Tax=Clostridium RepID=B6FSY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24010.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
putative efflux protein, MATE family
L2_037_240G1_scaffold_100_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12887..13723
DNA (837bp) protein (279aa)
Multidrug-efflux transporter 2 regulator n=3 Tax=Clostridium RepID=B6FSY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24009.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
MerR family transcriptional regulator
L2_037_240G1_scaffold_100_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13756..14268)
DNA (513bp) protein (171aa)
HTH domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSY4_9CLOT
HTH domain protein {ECO:0000313|EMBL:EEA80831.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator
L2_037_240G1_scaffold_100_15
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14305..15156)
DNA (852bp) protein (284aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=2 Tax=Clostridium RepID=B6FSY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24006.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_037_240G1_scaffold_100_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15173..16333)
DNA (1161bp) protein (387aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=2 Tax=Clostridium RepID=B6FSY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24004.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_037_240G1_scaffold_100_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16359..17264)
DNA (906bp) protein (302aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Quinolinate synthetase complex, A subunit n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSY7_9CLOT
nadA; Quinolinate synthetase A
L2_037_240G1_scaffold_100_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17390..18973)
DNA (1584bp) protein (528aa)
ABC1 family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSY8_9CLOT
ABC1 family protein {ECO:0000313|EMBL:EEA80835.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted unusual protein kinase
L2_037_240G1_scaffold_100_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18996..19337)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80836.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_037_240G1_scaffold_100_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19373..19744)
DNA (372bp) protein (124aa)
undecaprenol kinase (EC:2.7.1.66 2.7.1.107)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QPY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23992.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_037_240G1_scaffold_100_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19713..19859)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PZT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23991.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L2_037_240G1_scaffold_100_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19856..20254)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23988.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_037_240G1_scaffold_100_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20374..20640)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80839.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_037_240G1_scaffold_100_24
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20667..21068)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC23985.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L2_037_240G1_scaffold_100_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21065..22828)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80841.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Nucleoside-diphosphate-sugar epimerases
L2_037_240G1_scaffold_100_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22909..23532)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80842.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Phosphate transport regulator (distant homolog of PhoU)
L2_037_240G1_scaffold_100_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23549..24604)
DNA (1056bp) protein (352aa)
Phosphate transporter family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSZ6_9CLOT
Phosphate transporter family protein {ECO:0000313|EMBL:EEA80843.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Phosphate/sulphate permeases
L2_037_240G1_scaffold_100_28
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24623..25285)
DNA (663bp) protein (221aa)
TrkA N-terminal domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSZ7_9CLOT
TrkA N-terminal domain protein {ECO:0000313|EMBL:EEA80844.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
TrkA-N domain-containing protein
L2_037_240G1_scaffold_100_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25304..26608)
DNA (1305bp) protein (435aa)
H(+)-transporting two-sector ATPase (EC:3.6.3.14)
Potassium uptake protein, TrkH family n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSZ8_9CLOT
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EEA80845.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_037_240G1_scaffold_100_30
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26605..28251)
DNA (1647bp) protein (549aa)
Protein translocase subunit SecF n=1 Tax=Clostridium nexile CAG:348 RepID=R6PI06_9CLOT
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
SecD/SecF family protein-export membrane protein
Displaying items 1-30 of 77 in total

View Taxonomy