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L2_037_240G1_scaffold_110

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Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_110_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(257..697)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64957.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator, MerR family
L2_037_240G1_scaffold_110_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

821..1360
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY74_9FIRM
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KJF41341.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
NADPH-dependent FMN reductase.
L2_037_240G1_scaffold_110_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1363..1716
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY73_9FIRM
Alpha/beta hydrolase {ECO:0000313|EMBL:KJF41340.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Hydrolases of the alpha/beta superfamily
L2_037_240G1_scaffold_110_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1713..2225
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY73_9FIRM
Alpha/beta hydrolase {ECO:0000313|EMBL:KJF41340.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Hydrolases of the alpha/beta superfamily
L2_037_240G1_scaffold_110_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2222..2746
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64954.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
rhodanese domain-containing protein
L2_037_240G1_scaffold_110_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3346..3813)
DNA (468bp) protein (156aa)
SsrA-binding protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY71_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
SsrA-binding protein
L2_037_240G1_scaffold_110_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3887..4486)
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY70_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
recombination protein RecR
L2_037_240G1_scaffold_110_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4520..4864)
DNA (345bp) protein (115aa)
Nucleoid-associated protein HMPREF1032_01220 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY69_9FIRM
Nucleoid-associated protein HMPREF1032_01220 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
conserved hypothetical protein TIGR00103
L2_037_240G1_scaffold_110_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4883..6589)
DNA (1707bp) protein (569aa)
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY68_9FIRM
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:KJF41335.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_110_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6986..7549)
DNA (564bp) protein (188aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Phosphate propanoyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY67_9FIRM
propanediol utilization protein
L2_037_240G1_scaffold_110_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7656..8225
DNA (570bp) protein (190aa)
uracil-DNA glycosylase, family 4 (EC:2.7.7.7)
Uracil-DNA glycosylase, family 4 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY66_9FIRM
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EHL64948.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_110_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8326..8637
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64947.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_240G1_scaffold_110_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8909..10198)
DNA (1290bp) protein (430aa)
Cellulose 1 4-beta-cellobiosidase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UMH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41331.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hydrolase
L2_037_240G1_scaffold_110_14
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10198..11082)
DNA (885bp) protein (295aa)
ABC-type sugar transport system, permease component n=1 Tax=Clostridium termitidis CT1112 RepID=S0FEZ2_9CLOT
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EMS69070.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
binding-protein-dependent transport system inner membrane protein
L2_037_240G1_scaffold_110_15
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11098..12021)
DNA (924bp) protein (308aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVY8_MAHA5
Sugar ABC transporter permease {ECO:0000313|EMBL:KJF41330.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
CUT1 family carbohydrate ABC transporter membrane protein 1
L2_037_240G1_scaffold_110_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12093..13799)
DNA (1707bp) protein (569aa)
Family 1 extracellular solute-binding protein n=2 Tax=Paenibacillus mucilaginosus RepID=H6NB64_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KJF41329.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
family 1 extracellular solute-binding protein
L2_037_240G1_scaffold_110_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14049..16292)
DNA (2244bp) protein (748aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036B9C5B
Uncharacterized protein {ECO:0000313|EMBL:KJF41327.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_037_240G1_scaffold_110_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16827..17537)
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64997.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_037_240G1_scaffold_110_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17540..18670)
DNA (1131bp) protein (377aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
putative two-component histidine kinase (EC:2.7.13.3)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY61_9FIRM
L2_037_240G1_scaffold_110_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18799..20355)
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL64993.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
site-specific recombinase, DNA invertase Pin
L2_037_240G1_scaffold_110_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20590..20874)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF41325.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_110_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20816..21754)
DNA (939bp) protein (313aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY56_9FIRM
Serine dehydratase {ECO:0000313|EMBL:KJF41324.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
serine dehydratase
L2_037_240G1_scaffold_110_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21770..22429)
DNA (660bp) protein (220aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY55_9FIRM
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EHL65163.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
serine dehydratase
L2_037_240G1_scaffold_110_24
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22608..24017)
DNA (1410bp) protein (470aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY54_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHL65162.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
putative efflux protein, MATE family
L2_037_240G1_scaffold_110_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24188..24562)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY53_9FIRM
Sugar ABC transporter permease {ECO:0000313|EMBL:KJF41579.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
binding-protein-dependent transport system inner membrane protein
L2_037_240G1_scaffold_110_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24752..26110)
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65153.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
glucose-inhibited division protein A
L2_037_240G1_scaffold_110_27
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26091..26663)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41318.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_037_240G1_scaffold_110_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26692..28845)
DNA (2154bp) protein (718aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY43_9FIRM
Hydantoinase {ECO:0000313|EMBL:KJF41317.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hydantoinase/oxoprolinase
L2_037_240G1_scaffold_110_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28998..30299)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65150.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
C4-dicarboxylate anaerobic carrier-like protein
L2_037_240G1_scaffold_110_30
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30378..31055)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RY41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41578.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
Displaying items 1-30 of 120 in total

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