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L2_037_240G1_scaffold_119

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Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_119_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..173)
DNA (171bp) protein (57aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38327.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_119_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(673..1389)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73171.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_240G1_scaffold_119_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1386..2804)
DNA (1419bp) protein (473aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73170.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
glycosyl transferase family protein
L2_037_240G1_scaffold_119_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3028..4029)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73169.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
NAD-dependent epimerase/dehydratase
L2_037_240G1_scaffold_119_5
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4324..5754
DNA (1431bp) protein (477aa)
Amidohydrolase (Fragment) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38289.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
amidohydrolase
L2_037_240G1_scaffold_119_6
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5962..6417
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQK3_9FIRM
Membrane protein {ECO:0000313|EMBL:KJF38290.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_037_240G1_scaffold_119_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6440..7303
DNA (864bp) protein (288aa)
trxB; thioredoxin reductase (EC:1.8.1.9)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38291.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_119_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7354..7839
DNA (486bp) protein (162aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQK1_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:KJF38292.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_119_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7931..9118)
DNA (1188bp) protein (396aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73308.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L2_037_240G1_scaffold_119_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9171..10382)
DNA (1212bp) protein (404aa)
Cation diffusion facilitator family transporter n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ9_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KJF38296.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
cation diffusion facilitator family transporter
L2_037_240G1_scaffold_119_11
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10633..11214
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38294.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_119_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11548..13932)
DNA (2385bp) protein (795aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73305.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ATPases with chaperone activity, ATP-binding subunit
L2_037_240G1_scaffold_119_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14172..14423)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73304.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_240G1_scaffold_119_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14680..14919)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38224.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_119_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15270..15710
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73302.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
helix-turn-helix domain-containing protein
L2_037_240G1_scaffold_119_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15902..16111)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73301.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_240G1_scaffold_119_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16168..17010)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73300.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_240G1_scaffold_119_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17122..17835)
DNA (714bp) protein (238aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ1_9FIRM
L2_037_240G1_scaffold_119_19
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18432..19277
DNA (846bp) protein (282aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQJ0_9FIRM
yjeF C-terminal region, hydroxyethylthiazole kinase-related
L2_037_240G1_scaffold_119_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19349..20092
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73297.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Integral membrane protein, interacts with FtsH
L2_037_240G1_scaffold_119_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20448..20978)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73296.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
flavodoxin/nitric oxide synthase
L2_037_240G1_scaffold_119_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21210..21602
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73295.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
CopY family transcriptional regulator
L2_037_240G1_scaffold_119_23
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21592..23256
DNA (1665bp) protein (555aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73495.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
antirepressor regulating drug resistance protein
L2_037_240G1_scaffold_119_24
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23271..24401
DNA (1131bp) protein (377aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73494.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
peptidase M23
L2_037_240G1_scaffold_119_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24499..25737)
DNA (1239bp) protein (413aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF38394.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L2_037_240G1_scaffold_119_26
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25734..26279)
DNA (546bp) protein (182aa)
Sigma-70 region 2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38395.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ECF subfamily RNA polymerase sigma-24 factor
L2_037_240G1_scaffold_119_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26940..28661)
DNA (1722bp) protein (574aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
PAS domain S-box (EC:2.7.13.3)
PAS domain S-box protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQI3_9FIRM
L2_037_240G1_scaffold_119_28
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28668..29387)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73492.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
winged helix family two component transcriptional regulator
L2_037_240G1_scaffold_119_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29577..30239)
DNA (663bp) protein (221aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQI1_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
phosphate transport system regulatory protein PhoU
L2_037_240G1_scaffold_119_30
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30346..31107)
DNA (762bp) protein (254aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB 3 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQI0_9FIRM
Displaying items 1-30 of 81 in total

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