ggKbase home page

L2_037_240G1_scaffold_121

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_121_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

275..1099
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89066.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_037_240G1_scaffold_121_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1294..1452)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89067.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_037_240G1_scaffold_121_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1880..3778
DNA (1899bp) protein (633aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89068.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
transcriptional antiterminator, BglG
L2_037_240G1_scaffold_121_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3775..4818
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89069.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
exoaminopeptidase
L2_037_240G1_scaffold_121_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4834..5154
DNA (321bp) protein (107aa)
PTS system, Lactose/Cellobiose specific IIA subunit n=5 Tax=Firmicutes RepID=E4LXF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85958.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit
L2_037_240G1_scaffold_121_6
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5156..5488
DNA (333bp) protein (111aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=7 Tax=Firmicutes RepID=E4LXF0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85957.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
phosphotransferase system, lactose/cellobiose-specific IIB subunit
L2_037_240G1_scaffold_121_7
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5529..6854
DNA (1326bp) protein (442aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWL3_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system lactose/cellobiose family IIC subunit
L2_037_240G1_scaffold_121_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6924..8027
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89073.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
peptidase M24
L2_037_240G1_scaffold_121_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8017..9201
DNA (1185bp) protein (395aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89074.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
aminotransferase, class I and II
L2_037_240G1_scaffold_121_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9176..9823
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89075.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
RDD domain-containing protein
L2_037_240G1_scaffold_121_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9982..10200)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89076.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_037_240G1_scaffold_121_12
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10624..11673)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70168.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
hypothetical protein
L2_037_240G1_scaffold_121_13
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


12440..12733
DNA (294bp) protein (98aa)
30S ribosomal protein S6 n=7 Tax=Firmicutes RepID=E4LXE2_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ribosomal protein S6
L2_037_240G1_scaffold_121_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12753..13229
DNA (477bp) protein (159aa)
Single-stranded DNA-binding protein n=7 Tax=Firmicutes RepID=E4LXE1_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
single-strand binding protein
L2_037_240G1_scaffold_121_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


13250..13480
DNA (231bp) protein (77aa)
30S ribosomal protein S18 n=7 Tax=Firmicutes RepID=E4LXE0_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
SSU ribosomal protein S18P
L2_037_240G1_scaffold_121_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13631..14515
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LXD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36506.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_037_240G1_scaffold_121_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14493..16490
DNA (1998bp) protein (666aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AWY4_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EQJ61923.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
L2_037_240G1_scaffold_121_18
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


16468..16914
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=7 Tax=Firmicutes RepID=E4LXD7_9CLOT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
rplI; 50S ribosomal protein L9
L2_037_240G1_scaffold_121_19
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16923..18269
DNA (1347bp) protein (449aa)
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=3 Tax=Firmicutes RepID=E4LXD6_9CLOT
Replicative DNA helicase {ECO:0000313|EMBL:EGX70175.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
L2_037_240G1_scaffold_121_20
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18397..19143
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70176.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
metallo-beta-lactamase family protein
L2_037_240G1_scaffold_121_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19140..20228
DNA (1089bp) protein (363aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=G1VWM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89086.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
serine protease
L2_037_240G1_scaffold_121_22
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20247..20831
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AWX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85941.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
putative phosphoesterase or phosphohydrolase
L2_037_240G1_scaffold_121_23
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20863..21480
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX70179.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
TetR family transcriptional regulator
L2_037_240G1_scaffold_121_24
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21558..22442)
DNA (885bp) protein (295aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=G1VWN0_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:ENY89089.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_037_240G1_scaffold_121_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22742..23266
DNA (525bp) protein (175aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LXC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89090.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative phosphohydrolase, HD superfamily
L2_037_240G1_scaffold_121_26
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23263..23739
DNA (477bp) protein (159aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Ribosomal RNA large subunit methyltransferase H n=7 Tax=Firmicutes RepID=E4LXC8_9CLOT
rRNA large subunit methyltransferase
L2_037_240G1_scaffold_121_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23987..26359
DNA (2373bp) protein (791aa)
Efflux ABC transporter, permease protein n=2 Tax=Firmicutes RepID=E4LXC7_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFR36608.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC transporter permease
L2_037_240G1_scaffold_121_28
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26373..27143
DNA (771bp) protein (257aa)
ABC transporter, ATP-binding protein n=9 Tax=Firmicutes RepID=E4LXC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX70184.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
ABC transporter ATP-binding protein
L2_037_240G1_scaffold_121_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27150..27827
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=8 Tax=Firmicutes RepID=E4LXC5_9CLOT
Response regulator {ECO:0000313|EMBL:EQJ48546.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transcriptional regulator
L2_037_240G1_scaffold_121_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27910..29088
DNA (1179bp) protein (393aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Firmicutes RepID=E4LXC4_9CLOT
hypothetical protein
Displaying items 1-30 of 70 in total

View Taxonomy