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L2_037_240G1_scaffold_126

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_126_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

L2_037_240G1_scaffold_126_2
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(181..1362)
DNA (1182bp) protein (394aa)
Sodium/glutamate symporter n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JM03_CELLD
sodium/glutamate symporter
Sodium/glutamate symporter {ECO:0000313|EMBL:ADZ85783.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_037_240G1_scaffold_126_3
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1580..2308
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PJP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC18691.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
L2_037_240G1_scaffold_126_4
unknown

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2583..4607
DNA (2025bp) protein (675aa)

This feature has no annotations

L2_037_240G1_scaffold_126_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4678..5259)
DNA (582bp) protein (194aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Uncharacterized protein n=1 Tax=Enterobacter cloacae UCICRE 3 RepID=V3GL65_ENTCL
muraminidase
L2_037_240G1_scaffold_126_6
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5823..6827)
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) RepID=B0K829_THEP3
Uncharacterized protein {ECO:0000313|EMBL:KHO61640.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
hypothetical protein
L2_037_240G1_scaffold_126_7
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7089..7541)
DNA (453bp) protein (151aa)
VanZ-like protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PK54_9FIRM
VanZ-like protein {ECO:0000313|EMBL:EFB77152.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L2_037_240G1_scaffold_126_8
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7617..8378
DNA (762bp) protein (254aa)
PHP domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DGS3_9CLOT
PHP domain protein {ECO:0000313|EMBL:CDA77077.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
PHP domain-containing protein
L2_037_240G1_scaffold_126_9
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(8449..10392)
DNA (1944bp) protein (648aa)
UDP-N-acetylglucosamine 4,6-dehydratase id=2303229 bin=GWB2_Clostridiales_37_7 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
yveM; putative capsular polysaccharide biosynthesis protein YveM
Tax=GWB2_Clostridiales_37_7_curated
L2_037_240G1_scaffold_126_10
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

10500..11228
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q900_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29489.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
L2_037_240G1_scaffold_126_11
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11250..11924
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000375428C
Uncharacterized protein {ECO:0000313|EMBL:ERI69359.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
membrane protein
L2_037_240G1_scaffold_126_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11941..13407
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002F0D9BD
CotH protein {ECO:0000313|EMBL:EEF66352.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L2_037_240G1_scaffold_126_13
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13425..15563
DNA (2139bp) protein (713aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003803153
Uncharacterized protein {ECO:0000313|EMBL:EGN48010.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_037_240G1_scaffold_126_14
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15615..16670
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AM82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD61933.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L2_037_240G1_scaffold_126_15
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16677..18086
DNA (1410bp) protein (470aa)
glycosyl hydrolase n=1 Tax=Blautia producta RepID=UPI00036A9DB4
Uncharacterized protein {ECO:0000313|EMBL:EGN48008.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L2_037_240G1_scaffold_126_16
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18248..19933
DNA (1686bp) protein (562aa)
putative ABC transporter ATP-binding protein (EC:3.6.3.-)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00036D6D35
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYE87754.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
L2_037_240G1_scaffold_126_17
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

19937..20761
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00037BA15D
Cobalt transport protein {ECO:0000313|EMBL:ERT67973.1}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
cobalt transport family protein
L2_037_240G1_scaffold_126_18
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21457..21909)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIJ0_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ85460.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_037_240G1_scaffold_126_19
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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22114..22617
DNA (504bp) protein (168aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1M0J8_9FLAO
hypothetical protein
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKB55858.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
L2_037_240G1_scaffold_126_20
unknown

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22693..22890
DNA (198bp) protein (66aa)

This feature has no annotations

L2_037_240G1_scaffold_126_21
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22941..23171
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIS3_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ81995.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_037_240G1_scaffold_126_22
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23635..23775
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JIV7_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82029.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_037_240G1_scaffold_126_23
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23954..25966
DNA (2013bp) protein (671aa)
S-layer domain-containing protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JII8_CELLD
S-layer domain-containing protein
S-layer domain-containing protein {ECO:0000313|EMBL:ADZ85458.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_037_240G1_scaffold_126_24
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26102..26905
DNA (804bp) protein (268aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JII7_CELLD
peptidoglycan-binding lysin domain protein
Peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:ADZ85457.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_037_240G1_scaffold_126_25
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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26944..27639
DNA (696bp) protein (232aa)
PhoP family transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFB3C
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADZ85456.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_037_240G1_scaffold_126_26
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27643..29436
DNA (1794bp) protein (598aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
multi-sensor signal transduction histidine kinase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFB3D
integral membrane sensor signal transduction histidine kinase
L2_037_240G1_scaffold_126_27
unknown

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29529..30095
DNA (567bp) protein (189aa)

This feature has no annotations

L2_037_240G1_scaffold_126_28
unknown

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30101..31510
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC9D
L2_037_240G1_scaffold_126_29
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31588..32490
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFC9E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ85452.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_037_240G1_scaffold_126_30
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32596..33846
DNA (1251bp) protein (417aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JII1_CELLD
Displaying items 1-30 of 69 in total

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