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L2_037_240G1_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_138_1
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..290)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NY48_BIFBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEB22233.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L2_037_240G1_scaffold_138_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

457..1512
DNA (1056bp) protein (352aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CJZ2_BIFBI
L2_037_240G1_scaffold_138_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2082..2390)
DNA (309bp) protein (103aa)
Addiction module toxin, RelE/StbE family n=2 Tax=Mobiluncus mulieris RepID=D0YRW4_9ACTO
Addiction module toxin RelE {ECO:0000313|EMBL:KEF29263.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L2_037_240G1_scaffold_138_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2405..2695)
DNA (291bp) protein (97aa)
RelB/DinJ family addiction module antitoxin n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KW15_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KEF29262.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L2_037_240G1_scaffold_138_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3095..3568)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A7A5_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KEF29261.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L2_037_240G1_scaffold_138_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3771..4829
DNA (1059bp) protein (353aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium RepID=C0BUS0_9BIFI
Ribose operon repressor RbsR {ECO:0000313|EMBL:KEF29260.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ribose operon repressor RbsR
L2_037_240G1_scaffold_138_7
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5100..6056
DNA (957bp) protein (319aa)
Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Bifidobacterium RepID=C0BUS1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14402.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
putative nucleoside hydrolase protein
L2_037_240G1_scaffold_138_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6122..7573
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NQA7_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF29258.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
tetracycline resistance protein
L2_037_240G1_scaffold_138_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7694..8671
DNA (978bp) protein (326aa)
Putative ribokinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUS3_9BIFI
Sugar kinase {ECO:0000313|EMBL:KEF29257.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
sugar kinase
L2_037_240G1_scaffold_138_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8848..9861)
DNA (1014bp) protein (338aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=2 Tax=Bifidobacterium RepID=C0BUS4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14405.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L2_037_240G1_scaffold_138_11
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10124..10411
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=6 Tax=Bifidobacterium RepID=A1A3I1_BIFAA
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L2_037_240G1_scaffold_138_12
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10468..11127
DNA (660bp) protein (220aa)
Single-stranded DNA-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PXC9_9BIFI
single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L2_037_240G1_scaffold_138_13
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11198..11446
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=3 Tax=Bifidobacterium RepID=B6XSY6_9BIFI
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_037_240G1_scaffold_138_14
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11466..11912
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XSY7_9BIFI
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L2_037_240G1_scaffold_138_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13426..13743
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUT2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70135.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_037_240G1_scaffold_138_16
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13866..14594
DNA (729bp) protein (243aa)
MIP family channel protein n=2 Tax=Bifidobacterium RepID=C0BUT3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15487.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glycerol uptake permease
L2_037_240G1_scaffold_138_17
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15358..15744
DNA (387bp) protein (129aa)
Membrane protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GVE9_9BIFI
Membrane protein {ECO:0000313|EMBL:CCY19779.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
membrane protein
L2_037_240G1_scaffold_138_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15791..16924)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTG6_9BIFI
Glutamyl-Q tRNA(Asp) ligase {ECO:0000313|EMBL:KEF29248.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
glutamyl-Q tRNA(Asp) ligase
L2_037_240G1_scaffold_138_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17774..18598
DNA (825bp) protein (275aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUT9_9BIFI
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EEG70142.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04296.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_037_240G1_scaffold_138_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18691..19551
DNA (861bp) protein (287aa)
FAH family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU0_9BIFI
FAH family protein {ECO:0000313|EMBL:EEG70143.1}; Putative hydrolase {ECO:0000313|EMBL:BAR04295.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
L2_037_240G1_scaffold_138_21
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19786..22488
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTG3_9BIFI
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ATPase AAA
L2_037_240G1_scaffold_138_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22643..23527)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU2_9BIFI
Copper-transporting ATPase {ECO:0000313|EMBL:KEF29243.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ATPase P
L2_037_240G1_scaffold_138_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23700..25034
DNA (1335bp) protein (445aa)
RmuC domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29242.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L2_037_240G1_scaffold_138_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25481..28441
DNA (2961bp) protein (987aa)
Bacterial group 2 Ig-like protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU5_9BIFI
Glycosyl hydrolase {ECO:0000313|EMBL:BAR04291.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
arabinosidase
L2_037_240G1_scaffold_138_25
unknown

Not on your lists

comp(28444..28590)
DNA (147bp) protein (49aa)

This feature has no annotations

L2_037_240G1_scaffold_138_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28622..34711
DNA (6090bp) protein (2030aa)
Glycosyl hydrolase, family 43 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU7_9BIFI
Glycosyl hydrolase {ECO:0000313|EMBL:BAR04290.1}; Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EEG70150.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_037_240G1_scaffold_138_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34964..35626
DNA (663bp) protein (221aa)
Orotate phosphoribosyltransferase domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUU8_9BIFI
Orotate phosphoribosyltransferase domain protein {ECO:0000313|EMBL:EEG70151.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04289.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
orotate phosphoribosyltransferase
L2_037_240G1_scaffold_138_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36052..36849
DNA (798bp) protein (266aa)
RNA methyltransferase, TrmH family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUV0_9BIFI
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EEG70153.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
RNA methyltransferase
L2_037_240G1_scaffold_138_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37256..37552
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=3 Tax=Bifidobacterium RepID=R6Q0H8_9BIFI
glutamyl-tRNA amidotransferase
L2_037_240G1_scaffold_138_30
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37554..39083
DNA (1530bp) protein (510aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PAA2_9BIFI
glutamyl-tRNA amidotransferase
Displaying items 1-30 of 107 in total

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