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L2_037_240G1_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_204_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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281..1588
DNA (1308bp) protein (436aa)
Predicted membrane protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3I4_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL25796.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_240G1_scaffold_204_2
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1651..2322)
DNA (672bp) protein (224aa)
Predicted membrane protein n=2 Tax=Clostridiales RepID=D4MZW1_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK79039.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_037_240G1_scaffold_204_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2429..2860)
DNA (432bp) protein (144aa)
Transcriptional regulators n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNU1_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CCY98622.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Transcriptional regulators
L2_037_240G1_scaffold_204_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3161..4048
DNA (888bp) protein (296aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3I3_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL25795.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_240G1_scaffold_204_5
unknown

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4064..4216
DNA (153bp) protein (51aa)

This feature has no annotations

L2_037_240G1_scaffold_204_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4182..5678)
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSJ9_9FIRM
L2_037_240G1_scaffold_204_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6144..6995
DNA (852bp) protein (284aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type cobalt transport system, ATPase component n=2 Tax=Clostridiales RepID=D4M3I1_9FIRM
ABC-type cobalt transport system, ATPase component
L2_037_240G1_scaffold_204_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6980..7846
DNA (867bp) protein (289aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
ABC-type cobalt transport system, ATPase component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3I0_9FIRM
ABC-type cobalt transport system, ATPase component
L2_037_240G1_scaffold_204_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7843..8667
DNA (825bp) protein (275aa)
Energy-coupling factor transporter transmembrane protein EcfT n=2 Tax=Clostridiales RepID=D4M3H9_9FIRM
ABC-type cobalt transport system, permease component CbiQ and related transporters
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_240G1_scaffold_204_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8743..9495
DNA (753bp) protein (251aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSJ1_9FIRM
L2_037_240G1_scaffold_204_11
unknown

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9515..9673
DNA (159bp) protein (53aa)

This feature has no annotations

L2_037_240G1_scaffold_204_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9910..10755
DNA (846bp) protein (282aa)
Transcriptional antiterminator BglG family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PZK3_9FIRM
Transcriptional antiterminator BglG family {ECO:0000313|EMBL:CDC15132.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
transcriptional antiterminator, BglG family
L2_037_240G1_scaffold_204_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10968..12431
DNA (1464bp) protein (488aa)
PTS system N-acetylglucosamine-specific IIB component Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component Glc family (TC 4.A.1.1.2) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVA0_9FIRM
PTS system N-acetylglucosamine-specific IIB component Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component Glc family (TC 4.A.1.1.2) {ECO:0000313|EMBL:CDC15130.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2)
L2_037_240G1_scaffold_204_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13189..14412
DNA (1224bp) protein (408aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Tyrosine--tRNA ligase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3H5_9FIRM
L2_037_240G1_scaffold_204_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14502..15008
DNA (507bp) protein (169aa)
Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P9A9_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family {ECO:0000313|EMBL:CDC15126.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L2_037_240G1_scaffold_204_16
unknown

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15052..15330
DNA (279bp) protein (93aa)

This feature has no annotations

L2_037_240G1_scaffold_204_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15452..16501
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY31572.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L2_037_240G1_scaffold_204_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16539..16808
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6PZJ5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC15122.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_037_240G1_scaffold_204_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16903..17649
DNA (747bp) protein (249aa)
Predicted permeases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3H2_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBL25784.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_240G1_scaffold_204_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17919..18701)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3H1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25783.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_240G1_scaffold_204_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19001..19705
DNA (705bp) protein (235aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3H0_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CBL25782.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_240G1_scaffold_204_22
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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20109..21461
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WI28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EYD68484.1}; TaxID=1226633 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum subsp. funduliforme B35.;"
hypothetical protein
L2_037_240G1_scaffold_204_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21534..22943)
DNA (1410bp) protein (470aa)
Putative permease n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAE4_9FIRM
Putative permease {ECO:0000313|EMBL:CDC17704.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
xanthine permease
L2_037_240G1_scaffold_204_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23102..23608)
DNA (507bp) protein (169aa)
Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2N4_9FIRM
Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs {ECO:0000313|EMBL:CDC17705.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
L2_037_240G1_scaffold_204_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23601..24488)
DNA (888bp) protein (296aa)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs (EC:1.17.1.4)
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs {ECO:0000313|EMBL:CBL25773.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CBL25773.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3G1_9FIRM
L2_037_240G1_scaffold_204_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24481..26790)
DNA (2310bp) protein (770aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:CBL25772.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CBL25772.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3G0_9FIRM
L2_037_240G1_scaffold_204_27
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(26820..27206)
DNA (387bp) protein (129aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5Y169_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDA14946.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Cyclic nucleotide-binding domain.
L2_037_240G1_scaffold_204_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27581..28390
DNA (810bp) protein (270aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CBL25770.1}; EC=2.7.4.7 {ECO:0000313|EMBL:CBL25770.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Phosphomethylpyrimidine kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3F8_9FIRM
L2_037_240G1_scaffold_204_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28394..29566
DNA (1173bp) protein (391aa)
Probable hydroxymethylpyrimidine transporter CytX n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3F7_9FIRM
probable hydroxymethylpyrimidine transporter CytX
Probable hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:CBL25769.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_240G1_scaffold_204_30
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29571..30890)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2N8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17710.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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