ggKbase home page

L2_037_240G1_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_217_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

251..727
DNA (477bp) protein (159aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78576.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_037_240G1_scaffold_217_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

904..1854
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78575.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_037_240G1_scaffold_217_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1929..2723)
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78574.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type uncharacterized transport system, ATPase component
L2_037_240G1_scaffold_217_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2726..3643)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80430.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type uncharacterized transport system, permease component
L2_037_240G1_scaffold_217_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3794..4780)
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80432.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type uncharacterized transport system, periplasmic component
L2_037_240G1_scaffold_217_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5044..5808
DNA (765bp) protein (255aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80433.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_037_240G1_scaffold_217_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6078..6680
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80435.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_037_240G1_scaffold_217_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6684..7967)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80436.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_037_240G1_scaffold_217_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8311..9816
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CS08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80437.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_037_240G1_scaffold_217_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9866..10216
DNA (351bp) protein (117aa)
TIGR04097 family integral membrane protein n=2 Tax=Ruminococcus RepID=C6J8B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80438.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_037_240G1_scaffold_217_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10290..10430
DNA (141bp) protein (47aa)
RSAM-modified six-cysteine peptide SCIFF n=2 Tax=Ruminococcus RepID=C6J8B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80439.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_037_240G1_scaffold_217_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10511..11878
DNA (1368bp) protein (456aa)
Six-Cys-in-45 modification radical SAM protein n=2 Tax=Ruminococcus RepID=C6J8B3_9FIRM
Six-Cys-in-45 modification radical SAM protein {ECO:0000313|EMBL:EES78565.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L2_037_240G1_scaffold_217_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11990..14398
DNA (2409bp) protein (803aa)
Protein-export membrane protein SecD n=2 Tax=Ruminococcus RepID=C6J8B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80441.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
protein translocase subunit secF/protein translocase subunit secD
L2_037_240G1_scaffold_217_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14480..16192
DNA (1713bp) protein (571aa)
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8B1_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EES78563.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_037_240G1_scaffold_217_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16340..16864
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=2 Tax=Ruminococcus RepID=C6J8B0_9FIRM
L2_037_240G1_scaffold_217_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16902..19232
DNA (2331bp) protein (777aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A9_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:EES78561.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_037_240G1_scaffold_217_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19297..19926
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80449.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Zn-dependent hydrolases, including glyoxylases
L2_037_240G1_scaffold_217_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19919..21427
DNA (1509bp) protein (503aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80450.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_037_240G1_scaffold_217_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21451..22113
DNA (663bp) protein (221aa)
Metal dependent phosphohydrolase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR92_9FIRM
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDD80451.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HD-GYP domain
L2_037_240G1_scaffold_217_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22076..23302
DNA (1227bp) protein (409aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80453.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_037_240G1_scaffold_217_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23399..25195
DNA (1797bp) protein (599aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR32_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDD80455.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_037_240G1_scaffold_217_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25198..25956
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78555.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted permeases
L2_037_240G1_scaffold_217_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26124..27335)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78554.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_037_240G1_scaffold_217_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27619..29097
DNA (1479bp) protein (493aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80460.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Membrane-fusion protein
L2_037_240G1_scaffold_217_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29094..29765
DNA (672bp) protein (224aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J8A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78552.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_037_240G1_scaffold_217_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29771..31792
DNA (2022bp) protein (674aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6J899_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78551.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_037_240G1_scaffold_217_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31812..33071
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J898_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78550.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type antimicrobial peptide transport system, permease component
L2_037_240G1_scaffold_217_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33368..33625
DNA (258bp) protein (86aa)
HPr family phosphocarrier n=2 Tax=Ruminococcus RepID=C6J897_9FIRM
PTS system phosphocarrier protein Hpr {ECO:0000313|EMBL:CDD77258.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphotransferase system, phosphocarrier protein HPr
L2_037_240G1_scaffold_217_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33680..35296
DNA (1617bp) protein (539aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=2 Tax=Ruminococcus RepID=C6J896_9FIRM
L2_037_240G1_scaffold_217_30
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35505..36377
DNA (873bp) protein (291aa)
DegV family EDD domain-containing protein n=2 Tax=Ruminococcus RepID=C6J895_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EES78547.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
EDD domain protein, DegV family
Displaying items 1-30 of 45 in total

View Taxonomy