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L2_037_240G1_scaffold_284

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_284_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..128
DNA (126bp) protein (42aa)
Mannitol dehydrogenase domain protein n=4 Tax=Clostridiales RepID=A7B0H0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47397.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Mannitol dehydrogenase domain-containing protein
L2_037_240G1_scaffold_284_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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140..1546
DNA (1407bp) protein (469aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uronate isomerase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U832_9FIRM
glucuronate isomerase
L2_037_240G1_scaffold_284_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1601..2362)
DNA (762bp) protein (254aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=3 Tax=Lachnospiraceae RepID=A7B0H2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17002.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
transcriptional regulator, IclR family
L2_037_240G1_scaffold_284_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2596..3555
DNA (960bp) protein (320aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EDN78639.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EDN78639.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EDN78639.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=3 Tax=Lachnospiraceae RepID=A7B0H3_RUMGN
L2_037_240G1_scaffold_284_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3579..4604
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase, PfkB family n=3 Tax=Lachnospiraceae RepID=A7B0H4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17004.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_037_240G1_scaffold_284_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4793..5644
DNA (852bp) protein (284aa)
ketose-bisphosphate aldolases (EC:4.1.2.40 4.1.2.13)
Ketose-bisphosphate aldolase n=3 Tax=Lachnospiraceae RepID=A7B0H5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17005.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_037_240G1_scaffold_284_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5682..6692
DNA (1011bp) protein (337aa)
transcriptional regulator, LacI family (EC:5.1.1.1)
Sugar-binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B0H6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47391.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_037_240G1_scaffold_284_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6754..8280
DNA (1527bp) protein (509aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Carbohydrate kinase, FGGY family protein n=3 Tax=Lachnospiraceae RepID=A7B0H7_RUMGN
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EDN78643.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_037_240G1_scaffold_284_9
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8277..9326
DNA (1050bp) protein (350aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.251)
GroES-like protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNF0_9FIRM
GroES-like protein {ECO:0000313|EMBL:CCZ67308.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L2_037_240G1_scaffold_284_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9350..10282
DNA (933bp) protein (311aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
1-phosphofructokinase (EC:2.7.1.144)
Tagatose-6-phosphate kinase n=3 Tax=Lachnospiraceae RepID=A7B0H9_RUMGN
L2_037_240G1_scaffold_284_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10302..11312
DNA (1011bp) protein (337aa)
Aldo/keto reductases, related to diketogulonate reductase (EC:1.1.1.21)
Oxidoreductase, aldo/keto reductase family protein n=3 Tax=Lachnospiraceae RepID=A7B0I0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47387.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_037_240G1_scaffold_284_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11437..12258
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U843_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67311.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Transcriptional regulators
L2_037_240G1_scaffold_284_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12380..14686
DNA (2307bp) protein (769aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B0I2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47385.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_037_240G1_scaffold_284_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14703..16133
DNA (1431bp) protein (477aa)
Phosphotransferase system, EIIC n=4 Tax=Clostridiales RepID=A7B0I3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17013.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6)
L2_037_240G1_scaffold_284_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16308..17912
DNA (1605bp) protein (535aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPJ4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47382.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_037_240G1_scaffold_284_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17916..19721
DNA (1806bp) protein (602aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Lachnospiraceae RepID=A7B0I5_RUMGN
L2_037_240G1_scaffold_284_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19702..20700
DNA (999bp) protein (333aa)
Sugar-binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B0I6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47379.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
periplasmic binding protein/LacI transcriptional regulator
L2_037_240G1_scaffold_284_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21027..22001
DNA (975bp) protein (325aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BQH9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17017.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_037_240G1_scaffold_284_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22057..23553
DNA (1497bp) protein (499aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=3 Tax=Lachnospiraceae RepID=A7B0I8_RUMGN
L2_037_240G1_scaffold_284_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23566..24570
DNA (1005bp) protein (335aa)
Branched-chain amino acid ABC transporter, permease protein n=3 Tax=Lachnospiraceae RepID=A7B0I9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47376.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_037_240G1_scaffold_284_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24704..25819
DNA (1116bp) protein (372aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B0J0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47375.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_037_240G1_scaffold_284_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25920..26360
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B0J1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47374.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L2_037_240G1_scaffold_284_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26528..27376)
DNA (849bp) protein (283aa)
Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=A7B0J2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17022.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
AraC-type DNA-binding domain-containing proteins
L2_037_240G1_scaffold_284_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27495..28970
DNA (1476bp) protein (492aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5 2.7.1.51)
Carbohydrate kinase, FGGY family protein n=4 Tax=Clostridiales RepID=A7B0J3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47372.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L2_037_240G1_scaffold_284_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28992..30785
DNA (1794bp) protein (598aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=3 Tax=Lachnospiraceae RepID=A7B0J4_RUMGN
L2_037_240G1_scaffold_284_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30861..31307
DNA (447bp) protein (149aa)
Fucose dissimilation pathway protein FucU (EC:5.1.3.-)
RbsD/FucU transport family protein n=4 Tax=Clostridiales RepID=A7B0J5_RUMGN
RbsD/FucU transport family protein {ECO:0000313|EMBL:EDN78661.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_037_240G1_scaffold_284_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31528..32316
DNA (789bp) protein (263aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B0J6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47369.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase.
L2_037_240G1_scaffold_284_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


32749..35397
DNA (2649bp) protein (883aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TNY0_9FIRM
L2_037_240G1_scaffold_284_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35410..37644
DNA (2235bp) protein (745aa)
Arylsulfatase n=3 Tax=Lachnospiraceae RepID=A7B0J8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47367.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L2_037_240G1_scaffold_284_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37637..38929
DNA (1293bp) protein (431aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BPK8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47366.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Displaying items 1-30 of 35 in total

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