ggKbase home page

L2_037_240G1_scaffold_311

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_311_1
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(601..2481)
DNA (1881bp) protein (627aa)
Conserved membrane-spanning protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPY0_9BACI
Membrane protein {ECO:0000313|EMBL:KEZ55795.1}; TaxID=1423321 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
hypothetical protein
L2_037_240G1_scaffold_311_2
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3036..4016
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40354.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ABC transporter periplasmic subunit-1
L2_037_240G1_scaffold_311_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4029..4958
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67561.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
binding-protein-dependent transport system inner membrane protein
L2_037_240G1_scaffold_311_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5048..6841
DNA (1794bp) protein (598aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67560.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L2_037_240G1_scaffold_311_5
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6989..7936
DNA (948bp) protein (316aa)
PHP domain protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQ71_CLOPH
phosphotransferase domain-containing protein
PHP domain protein {ECO:0000313|EMBL:ABX43383.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_037_240G1_scaffold_311_6
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8003..9301
DNA (1299bp) protein (433aa)
Major facilitator superfamily MFS_1 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQ70_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ64898.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
L2_037_240G1_scaffold_311_7

Not on your lists

comp(9462..10187)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=F7KL73_9FIRM
Uncultured bacterium extrachromosomal DNA RGI01485 {ECO:0000313|EMBL:CDL66509.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
IS110, transposase
L2_037_240G1_scaffold_311_8
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10206..10637)
DNA (432bp) protein (144aa)
Transposase n=1 Tax=Enterococcus faecalis ERV73 RepID=J6QS01_ENTFL
IS110, transposase
Transposase {ECO:0000313|EMBL:EJV04553.1}; TaxID=1134790 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ERV37.;"
L2_037_240G1_scaffold_311_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10925..11995
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RW09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67574.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator, LacI family
L2_037_240G1_scaffold_311_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12247..12600
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DI71_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77395.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_240G1_scaffold_311_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12654..14009)
DNA (1356bp) protein (452aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CBK77394.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK77394.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DI70_CLOSC
L2_037_240G1_scaffold_311_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14002..14922)
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DI69_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77393.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_240G1_scaffold_311_13
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14934..15200)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DI68_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77392.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_240G1_scaffold_311_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15245..16108)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DI67_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77391.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_240G1_scaffold_311_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16365..16568
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DI66_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77390.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_240G1_scaffold_311_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16570..18540
DNA (1971bp) protein (657aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DI65_CLOSC
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBK77389.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_240G1_scaffold_311_17
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18610..19125
DNA (516bp) protein (172aa)
DNA primase (Bacterial type) n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKZ2_CLOSC
DNA primase (bacterial type)
DNA primase (Bacterial type) {ECO:0000313|EMBL:CBK78366.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_240G1_scaffold_311_18
Leptotrichia wadei, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(19269..20354)
DNA (1086bp) protein (362aa)
Glycerol dehydrogenase n=1 Tax=Leptotrichia wadei F0279 RepID=U2QA98_9FUSO
Glycerol dehydrogenase {ECO:0000313|EMBL:ERK53014.1}; TaxID=888055 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia wadei F0279.;"
iron-containing alcohol dehydrogenase
L2_037_240G1_scaffold_311_19
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(20721..21467)
DNA (747bp) protein (249aa)
LmbE family protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EEN5_9FIRM
LmbE family protein {ECO:0000313|EMBL:CDA98360.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
LmbE family protein
L2_037_240G1_scaffold_311_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(21464..22450)
DNA (987bp) protein (329aa)
Aldo/keto reductase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMJ7_9FIRM
Aldo/keto reductase {ECO:0000313|EMBL:CDA98359.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L2_037_240G1_scaffold_311_21
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22519..23724)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJ93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31557.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_037_240G1_scaffold_311_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23738..25429)
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57267.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
HAMP domain-containing protein,histidine kinase
L2_037_240G1_scaffold_311_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25625..27160
DNA (1536bp) protein (512aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57266.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
family 1 extracellular solute-binding protein
L2_037_240G1_scaffold_311_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27336..28256
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57265.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
binding-protein-dependent transport system inner membrane protein
L2_037_240G1_scaffold_311_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28270..29175
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57264.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
binding-protein-dependent transport system inner membrane protein
L2_037_240G1_scaffold_311_26
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29216..30259
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LTC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90617.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
hypothetical protein
L2_037_240G1_scaffold_311_27
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30309..30986
DNA (678bp) protein (226aa)
Putative Dimethylmenaquinone methyltransferase n=10 Tax=Vibrio nigripulchritudo RepID=U4KI87_9VIBR
putative Dimethylmenaquinone methyltransferase
Putative Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:CCN40740.1}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo FTn2.;"
L2_037_240G1_scaffold_311_28
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31008..31997
DNA (990bp) protein (330aa)
2-dehydro-3-deoxygalactonokinase (EC:2.7.1.58)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVW7_9CLOT
Putative 2-dehydro-3-deoxygalactonokinase {ECO:0000313|EMBL:GAL49041.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
L2_037_240G1_scaffold_311_29
Staphylococcus lugdunensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32029..32664
DNA (636bp) protein (212aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EFU83486.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EFU83486.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EFU83486.1};; TaxID=525377 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus lugdunensis M23590.;"
4-Hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase n=3 Tax=Staphylococcus lugdunensis RepID=D3QFL5_STALH
KDPG and KHG aldolase family protein
L2_037_240G1_scaffold_311_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32788..33726)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75967.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Domain of unknown function (DUF1848).
Displaying items 1-30 of 39 in total

View Taxonomy