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L2_037_240G1_scaffold_332

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_332_1
unknown

Not on your lists

2..118
DNA (117bp) protein (39aa)

This feature has no annotations

L2_037_240G1_scaffold_332_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

180..590
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00079.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L2_037_240G1_scaffold_332_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(870..3332)
DNA (2463bp) protein (821aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV24_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG69998.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_037_240G1_scaffold_332_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3554..4879
DNA (1326bp) protein (442aa)
Efflux ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BV25_9BIFI
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEG69999.1}; Putative ABC transporter permease component {ECO:0000313|EMBL:BAR04338.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
peptide ABC transporter permease
L2_037_240G1_scaffold_332_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4876..6060
DNA (1185bp) protein (395aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV26_9BIFI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEF28785.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter ATP-binding protein
L2_037_240G1_scaffold_332_6
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6178..6969)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XSU6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB22309.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
phosphohydrolase
L2_037_240G1_scaffold_332_7
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7096..7980)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XSU5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB22308.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
glutamine amidotransferase
L2_037_240G1_scaffold_332_8
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8181..10358)
DNA (2178bp) protein (726aa)
Probable potassium transport system protein kup n=2 Tax=Bifidobacterium RepID=C0BV30_9BIFI
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
potassium transporter Kup
L2_037_240G1_scaffold_332_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10591..11547)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NTL8_9BIFI
Hydrolase TatD {ECO:0000313|EMBL:KEF28789.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hydrolase TatD
L2_037_240G1_scaffold_332_10
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11669..14029)
DNA (2361bp) protein (787aa)
alpha-arabinofuranosidase I (EC:3.2.1.55)
Carbohydrate binding domain protein n=2 Tax=Bifidobacterium RepID=C0BV32_9BIFI
Carbohydrate binding domain protein {ECO:0000313|EMBL:EEG70006.1}; Putative alpha-L-arabinofuranosidase {ECO:0000313|EMBL:BAR04344.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_037_240G1_scaffold_332_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14275..14418)
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BV34_9BIFI
Truncated alpha-galactosidase {ECO:0000313|EMBL:BAR04346.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
alpha-galactosidase
L2_037_240G1_scaffold_332_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14662..15894
DNA (1233bp) protein (411aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV35_9BIFI
LacI family transcriptional regulator {ECO:0000313|EMBL:KEF28791.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
LacI-type transcriptional regulator
L2_037_240G1_scaffold_332_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15980..18418)
DNA (2439bp) protein (813aa)
Alpha-galactosidase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV36_9BIFI
Alpha-galactosidase {ECO:0000313|EMBL:KEF28792.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
alpha-galactosidase
L2_037_240G1_scaffold_332_14
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18582..19304)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BV37_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15508.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_037_240G1_scaffold_332_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19499..21286)
DNA (1788bp) protein (596aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV38_9BIFI
ABC transporter ATP-binding and permease components {ECO:0000313|EMBL:BAR04350.1}; ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG70012.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
multidrug ABC transporter ATP-binding protein
L2_037_240G1_scaffold_332_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21317..23179)
DNA (1863bp) protein (621aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV39_9BIFI
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEF28795.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter permease
L2_037_240G1_scaffold_332_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23579..24676
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NXK7_9BIFI
Lipase {ECO:0000313|EMBL:KEF28796.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
lipase
L2_037_240G1_scaffold_332_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25195..25383
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q1Q3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15907.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_037_240G1_scaffold_332_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25495..26316
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NXK2_9BIFI
Acetyl esterase {ECO:0000313|EMBL:KEF28798.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
acetyl esterase
L2_037_240G1_scaffold_332_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26520..27701)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XST0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR04355.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_037_240G1_scaffold_332_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28025..28399)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BV51_9BIFI
Glycosyltransferase {ECO:0000313|EMBL:KEF28804.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
glycosyltransferase
L2_037_240G1_scaffold_332_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28478..28762
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q1D4_9BIFI
Diguanylate cyclase {ECO:0000313|EMBL:KEF28806.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Sensory box/GGDEF family protein
L2_037_240G1_scaffold_332_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28895..29911
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUF1_9BIFI
LacI family transcriptional regulator {ECO:0000313|EMBL:KEF28807.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
LacI family transcriptional regulator
L2_037_240G1_scaffold_332_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30005..31312)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P503_9BIFI
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000313|EMBL:KEF28808.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
N-acetylglucosamine-6-phosphate deacetylase
L2_037_240G1_scaffold_332_25
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31633..32445)
DNA (813bp) protein (271aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NXA3_9BIFI
glucosamine-6-phosphate deaminase
L2_037_240G1_scaffold_332_26
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32516..34522)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PB81_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15811.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glycosyl hydrolase
L2_037_240G1_scaffold_332_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34650..35582)
DNA (933bp) protein (311aa)
ROK family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BV60_9BIFI
Glucokinase {ECO:0000313|EMBL:BAR04367.1}; ROK family protein {ECO:0000313|EMBL:EEG70034.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
NagC family transcriptional regulator
L2_037_240G1_scaffold_332_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35688..35900)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUF5_9BIFI
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEF28812.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
L2_037_240G1_scaffold_332_29
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36340..37197)
DNA (858bp) protein (286aa)
Oligo-1,6-glucosidase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWH6_BIFL1
Oligo-1,6-glucosidase {ECO:0000313|EMBL:BAR02544.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
oligo-1,6-glucosidase
Displaying 29 items

View Taxonomy