ggKbase home page

L2_037_240G1_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_348_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..345)
DNA (345bp) protein (115aa)
Divergent AAA domain protein n=2 Tax=Bifidobacterium breve RepID=D4BP48_BIFBR
Divergent AAA domain protein {ECO:0000313|EMBL:EEI81435.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
putative transcriptional regulator
L2_037_240G1_scaffold_348_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(519..1139)
DNA (621bp) protein (207aa)
Amidases related to nicotinamidase n=15 Tax=Bifidobacterium RepID=D6D8Y0_BIFLN
amidase
Nicotinamidase {ECO:0000313|EMBL:AIW43668.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_037_240G1_scaffold_348_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1292..1693
DNA (402bp) protein (134aa)
Predicted lactoylglutathione lyase n=15 Tax=Bifidobacterium RepID=D6D8X9_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24709.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_037_240G1_scaffold_348_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1782..2720)
DNA (939bp) protein (313aa)
Co/Zn/Cd efflux system component n=10 Tax=Bifidobacterium longum RepID=B3DSG0_BIFLD
czcD2; czcd2
Cobalt transporter {ECO:0000313|EMBL:AIW43670.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_037_240G1_scaffold_348_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3008..3829
DNA (822bp) protein (274aa)
Uncharacterized protein n=7 Tax=Bifidobacterium longum RepID=Q8G5V8_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24707.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_037_240G1_scaffold_348_6
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3984..4214
DNA (231bp) protein (77aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=R5MVW1_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95910.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_037_240G1_scaffold_348_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4216..4425
DNA (210bp) protein (70aa)
Transcriptional regulator n=20 Tax=Bifidobacterium RepID=D6D8X5_BIFLN
DNA-binding helix-turn-helix protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95911.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_037_240G1_scaffold_348_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4555..5919)
DNA (1365bp) protein (455aa)
Xanthine permease n=12 Tax=Bifidobacterium RepID=D6D8X4_BIFLN
xanthine/uracil transport protein
Xanthine/uracil transport protein {ECO:0000313|EMBL:BAJ70905.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_037_240G1_scaffold_348_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5970..6551)
DNA (582bp) protein (194aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Xanthine phosphoribosyltransferase n=17 Tax=Bifidobacterium RepID=XPT_BIFLD
apt2; apt2
L2_037_240G1_scaffold_348_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6638..9370
DNA (2733bp) protein (911aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GTL7_BIFLN
uvrD2; uvrd2
L2_037_240G1_scaffold_348_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9875..11092
DNA (1218bp) protein (406aa)
Permease family protein n=3 Tax=Bifidobacterium longum RepID=T2I1L5_BIFLN
abc-type transport system for lysophospholipase l1 biosynthesis permease component
Permease family protein {ECO:0000313|EMBL:CCK34853.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L2_037_240G1_scaffold_348_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11094..12062
DNA (969bp) protein (323aa)
ABC transporter ATP-binding protein n=8 Tax=Bifidobacterium longum RepID=F8AQU3_BIFLN
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIJ28429.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_037_240G1_scaffold_348_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12261..12887
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=20 Tax=Bifidobacterium RepID=RS4_BIFLD
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_037_240G1_scaffold_348_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12978..14942)
DNA (1965bp) protein (655aa)
Acyltransferase n=13 Tax=Bifidobacterium longum RepID=C2GTL2_BIFLN
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66403.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
hypothetical protein
L2_037_240G1_scaffold_348_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15068..15796
DNA (729bp) protein (243aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=Q8G5W7_BIFLO
hypothetical protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEI81418.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_037_240G1_scaffold_348_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15999..16397
DNA (399bp) protein (133aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B3DSE5_BIFLD
hypothetical protein
PF06103 family protein {ECO:0000313|EMBL:EIJ24477.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_037_240G1_scaffold_348_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16397..16633
DNA (237bp) protein (79aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=B3DSE4_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98063.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_037_240G1_scaffold_348_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16761..19442
DNA (2682bp) protein (894aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Alanine--tRNA ligase n=11 Tax=Bifidobacterium RepID=SYA_BIFLO
alanyl-tRNA synthase
L2_037_240G1_scaffold_348_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19451..19909
DNA (459bp) protein (153aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Putative Holliday junction resolvase n=8 Tax=Bifidobacterium RepID=RUVX_BIFLD
endonuclease for recombination
L2_037_240G1_scaffold_348_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19920..21101
DNA (1182bp) protein (394aa)
Aminodeoxychorismate lyase n=11 Tax=Bifidobacterium longum RepID=B3DSE1_BIFLD
aminodeoxychorismate lyase
YceG family protein {ECO:0000313|EMBL:EIJ24486.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_037_240G1_scaffold_348_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21269..21742)
DNA (474bp) protein (158aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=C2GTK5_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95926.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_037_240G1_scaffold_348_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21806..22993
DNA (1188bp) protein (396aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Chorismate synthase n=14 Tax=Bifidobacterium RepID=AROC_BIFLD
chorismate synthase
L2_037_240G1_scaffold_348_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23076..24698
DNA (1623bp) protein (541aa)
Bifunctional shikimate kinase/3-dehydroquinate synthase n=12 Tax=Bifidobacterium RepID=AROKB_BIFLO
Shikimate kinase {ECO:0000313|EMBL:ACD98057.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
shikimate kinase
L2_037_240G1_scaffold_348_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24862..25308
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
3-dehydroquinate dehydratase n=15 Tax=Bifidobacterium RepID=B3DSD7_BIFLD
3-dehydroquinate dehydratase
L2_037_240G1_scaffold_348_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25404..26960
DNA (1557bp) protein (519aa)
Dipeptidase, putative n=3 Tax=Bifidobacterium RepID=D6D8W1_BIFLN
Putative peptidase {ECO:0000313|EMBL:BAJ66414.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
peptidase
L2_037_240G1_scaffold_348_26
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27106..28767
DNA (1662bp) protein (554aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
CTP synthase n=17 Tax=Bifidobacterium RepID=PYRG_BIFLO
pyrG; pyrg
L2_037_240G1_scaffold_348_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29013..30608
DNA (1596bp) protein (532aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MT31_BIFL1
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70925.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_037_240G1_scaffold_348_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30832..32331
DNA (1500bp) protein (500aa)
Putative ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MT32_BIFL1
ABC transporter permease
Putative ABC transporter permease component {ECO:0000313|EMBL:BAJ70926.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_037_240G1_scaffold_348_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32337..33572
DNA (1236bp) protein (412aa)
ABC-type transport system for Fe-S cluster assembly permease component n=14 Tax=Bifidobacterium RepID=B3DSD2_BIFLD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIW43694.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_037_240G1_scaffold_348_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33598..34377
DNA (780bp) protein (260aa)
ABC-type transport system for Fe-S cluster assembly ATPase component n=16 Tax=Bifidobacterium RepID=B3DSD1_BIFLD
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEI97668.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Displaying items 1-30 of 48 in total

View Taxonomy