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L2_037_240G1_scaffold_373

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_373_1
unknown

Not on your lists

comp(110..292)
DNA (183bp) protein (61aa)

This feature has no annotations

L2_037_240G1_scaffold_373_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

922..1155
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=K2H8T4_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53334.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_037_240G1_scaffold_373_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1251..2492
DNA (1242bp) protein (414aa)
Putative virion core protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EM97_BIFBS
putative virion core protein
Putative virion core protein {ECO:0000313|EMBL:ADO53333.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_037_240G1_scaffold_373_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2765..3352)
DNA (588bp) protein (196aa)
Putative transcriptional regulator n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HSK1_BIFBI
Putative transcriptional regulator {ECO:0000313|EMBL:EKE50413.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
transcriptional regulator
L2_037_240G1_scaffold_373_5
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3557..3925
DNA (369bp) protein (123aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=E4VAC1_BIFBI
putative Zn-dependent protease
Uncharacterized protein {ECO:0000313|EMBL:CDB23094.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_037_240G1_scaffold_373_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4378..4587
DNA (210bp) protein (70aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=E4VAC0_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI83786.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_037_240G1_scaffold_373_7
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4717..5067
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=E4VAB9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB23092.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L2_037_240G1_scaffold_373_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5139..5564)
DNA (426bp) protein (142aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=7 Tax=Bifidobacterium RepID=E3ER56_BIFBS
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_037_240G1_scaffold_373_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5945..6592
DNA (648bp) protein (216aa)
Phospholipase/carboxylesterase n=2 Tax=Bifidobacterium bifidum RepID=E3ER55_BIFBS
phospholipase/carboxylesterase
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ERI83782.1}; Putative esterase {ECO:0000313|EMBL:BAQ98376.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_037_240G1_scaffold_373_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6604..8562)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAB6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50558.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_037_240G1_scaffold_373_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9072..9716)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2ME30_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF15552.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L2_037_240G1_scaffold_373_12
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9987..11588
DNA (1602bp) protein (534aa)
Glycosyl transferase family 2 n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HA63_9BIFI
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDB23087.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
family 2 glycosyl transferase
L2_037_240G1_scaffold_373_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11630..12268
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ER51_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53323.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L2_037_240G1_scaffold_373_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12353..13168
DNA (816bp) protein (272aa)
Transcriptional regulator, LysR family n=2 Tax=Bifidobacterium bifidum RepID=E4NXG1_BIFBP
LysR family transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:ERI83776.1}; Transcriptional regulator {ECO:0000313|EMBL:BAQ98369.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L2_037_240G1_scaffold_373_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13387..14481
DNA (1095bp) protein (365aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=U2BZZ3_BIFBI
Membrane spanning protein {ECO:0000313|EMBL:KFI43199.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L2_037_240G1_scaffold_373_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14576..14872)
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6GNJ7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ERI83773.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_037_240G1_scaffold_373_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15132..15944
DNA (813bp) protein (271aa)
phosphoglycerate mutase (EC:2.7.1.105)
Phosphoglycerate mutase domain-containing protein n=7 Tax=Bifidobacterium RepID=E4NXF8_BIFBP
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EFR50550.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L2_037_240G1_scaffold_373_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16102..17391
DNA (1290bp) protein (430aa)
Putative permease n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DVG7_BIFBI
Putative purine or uracil transport protein {ECO:0000313|EMBL:BAQ98365.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
pyrP; uracil permease PyrP
L2_037_240G1_scaffold_373_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17523..18077)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAA6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50548.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L2_037_240G1_scaffold_373_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18226..18402
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2M2M3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:ERI83769.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L2_037_240G1_scaffold_373_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18452..18769
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAA5_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50547.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
short-chain alcohol dehydrogenase
L2_037_240G1_scaffold_373_22
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18830..19621)
DNA (792bp) protein (264aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=K2INU5_BIFBI
ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50430.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_037_240G1_scaffold_373_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19618..20379)
DNA (762bp) protein (254aa)
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:KFI43193.1}; EC=3.6.3.42 {ECO:0000313|EMBL:KFI43193.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
ABC transporter ATP-binding protein (EC:3.6.3.42)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DVG4_BIFBI
L2_037_240G1_scaffold_373_24
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20547..21386
DNA (840bp) protein (280aa)
rRNA methylase n=3 Tax=Bifidobacterium RepID=R6HAM9_9BIFI
rRNA methylase {ECO:0000313|EMBL:CDB23272.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
rRNA methylase
L2_037_240G1_scaffold_373_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


21471..22538
DNA (1068bp) protein (356aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Phenylalanine--tRNA ligase alpha subunit n=8 Tax=Bifidobacterium RepID=E3ER39_BIFBS
pheS; phenylalanyl-tRNA synthetase subunit alpha
L2_037_240G1_scaffold_373_26
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22546..25155
DNA (2610bp) protein (870aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Bifidobacterium RepID=R6GNK6_9BIFI
L2_037_240G1_scaffold_373_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25190..25810
DNA (621bp) protein (207aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=E4VA98_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE50435.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L2_037_240G1_scaffold_373_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25913..27007
DNA (1095bp) protein (365aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ER36_BIFBS
argC; N-acetyl-gamma-glutamyl-phosphate reductase
L2_037_240G1_scaffold_373_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27004..28173
DNA (1170bp) protein (390aa)
argJ; arginine biosynthesis bifunctional protein (EC:2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=3 Tax=Bifidobacterium bifidum RepID=E4VA96_BIFBI
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L2_037_240G1_scaffold_373_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28233..29189
DNA (957bp) protein (319aa)
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Acetylglutamate kinase n=7 Tax=Bifidobacterium RepID=E3ER34_BIFBS
Displaying items 1-30 of 34 in total

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