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L2_037_240G1_scaffold_422

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_422_1
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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263..718
DNA (456bp) protein (152aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=5 Tax=Firmicutes RepID=E4LYX1_9CLOT
cytidine/deoxycytidylate deaminase
L2_037_240G1_scaffold_422_2
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

813..2621
DNA (1809bp) protein (603aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1AY86_9FIRM
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EHO32590.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_037_240G1_scaffold_422_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2626..2934
DNA (309bp) protein (103aa)
Nucleoid-associated protein HMPREF9406_3109 n=7 Tax=Firmicutes RepID=E4LYX3_9CLOT
Nucleoid-associated protein QSI_2576 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_037_240G1_scaffold_422_4
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2934..3530
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B4D0_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
recombinase RecR
L2_037_240G1_scaffold_422_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3835..4770
DNA (936bp) protein (312aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LYX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83896.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_037_240G1_scaffold_422_6
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5001..5558)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B4C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32585.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L2_037_240G1_scaffold_422_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5618..6391
DNA (774bp) protein (258aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=5 Tax=Firmicutes RepID=E4LYX7_9CLOT
L2_037_240G1_scaffold_422_8
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6666..7886)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B4C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32583.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
FtsW/RodA/SpoVE family cell division protein
L2_037_240G1_scaffold_422_9
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8111..10642
DNA (2532bp) protein (844aa)
DNA mismatch repair protein MutS n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B4C4_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
DNA mismatch repair protein MutS
L2_037_240G1_scaffold_422_10
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10703..12790
DNA (2088bp) protein (696aa)
DNA mismatch repair protein MutL n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B4C3_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
mutL; DNA mismatch repair protein MutL
L2_037_240G1_scaffold_422_11
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12923..13834
DNA (912bp) protein (304aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=3 Tax=unclassified Erysipelotrichaceae RepID=G1VPU2_9FIRM
L2_037_240G1_scaffold_422_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13836..14576
DNA (741bp) protein (247aa)
Uncharacterized protein n=3 Tax=unclassified Erysipelotrichaceae RepID=G1VPU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88549.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
molybdopterin and thiamine biosynthesis family
L2_037_240G1_scaffold_422_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14566..15345
DNA (780bp) protein (260aa)
Nitroreductase family protein n=3 Tax=Firmicutes RepID=E4LYY3_9CLOT
Nitroreductase family protein {ECO:0000313|EMBL:EQJ59899.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
nitroreductase
L2_037_240G1_scaffold_422_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15384..15806
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B4B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ59900.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_037_240G1_scaffold_422_15
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15891..16229
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B4B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32577.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_037_240G1_scaffold_422_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16549..16887
DNA (339bp) protein (113aa)
Transcriptional regulator, PadR family n=4 Tax=Firmicutes RepID=E4LYY5_9CLOT
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:EQJ59901.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Transcriptional regulator, PadR family
L2_037_240G1_scaffold_422_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16865..17425
DNA (561bp) protein (187aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LYY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR35897.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_037_240G1_scaffold_422_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17607..18257)
DNA (651bp) protein (217aa)
Pyridoxal phosphate enzyme, YggS family n=7 Tax=Firmicutes RepID=E4LYY7_9CLOT
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:ENY88555.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_037_240G1_scaffold_422_19
unknown

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18825..18947
DNA (123bp) protein (41aa)

This feature has no annotations

L2_037_240G1_scaffold_422_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18994..19626
DNA (633bp) protein (211aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Thymidylate kinase n=5 Tax=Firmicutes RepID=E4LYY9_9CLOT
thymidylate kinase
L2_037_240G1_scaffold_422_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19619..20623
DNA (1005bp) protein (335aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta' subunit n=5 Tax=Firmicutes RepID=E4LYZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC83871.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_037_240G1_scaffold_422_22
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20707..21975)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BP22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO81568.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
integrase
L2_037_240G1_scaffold_422_23
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21981..22277)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JGH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT26903.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
phage protein
L2_037_240G1_scaffold_422_24
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22291..22788)
DNA (498bp) protein (166aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus albus 8 RepID=E9S8T7_RUMAL
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EGC04268.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
phage repressor
L2_037_240G1_scaffold_422_25
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22785..23129)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5FAR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE47660.1}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
helix-turn-helix family protein
L2_037_240G1_scaffold_422_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23143..23691)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B206_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87102.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
transcriptional regulator
L2_037_240G1_scaffold_422_27
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23828..24067
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VHB2_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC67410.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L2_037_240G1_scaffold_422_28
unknown

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24046..24471
DNA (426bp) protein (142aa)

This feature has no annotations

L2_037_240G1_scaffold_422_29
unknown

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24476..24628
DNA (153bp) protein (51aa)

This feature has no annotations

L2_037_240G1_scaffold_422_30
unknown

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comp(24570..24779)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying items 1-30 of 54 in total

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