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L2_037_240G1_scaffold_661

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_661_1
unknown

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comp(3..68)
DNA (66bp) protein (22aa)
thiamine pyrophosphokinase
L2_037_240G1_scaffold_661_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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466..1101
DNA (636bp) protein (212aa)
Translation initiation factor 3 n=13 Tax=Bifidobacterium RepID=B3DQT2_BIFLD
infC; infc
Translation initiation factor IF-3 {ECO:0000313|EMBL:KEY31456.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_037_240G1_scaffold_661_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1082..1276
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=20 Tax=Bifidobacterium RepID=RL35_BIFLD
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_037_240G1_scaffold_661_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1329..1712
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=14 Tax=Bifidobacterium RepID=RL20_BIFLD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_037_240G1_scaffold_661_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1773..2708
DNA (936bp) protein (312aa)
Tyrosine recombinase XerD n=14 Tax=Bifidobacterium RepID=D6DCV1_BIFLN
integrase/recombinase
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_037_240G1_scaffold_661_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2836..5682
DNA (2847bp) protein (949aa)
ABC-type antimicrobial peptide transport system, ATPase component n=11 Tax=Bifidobacterium RepID=D6DCV2_BIFLN
ABC transporter {ECO:0000313|EMBL:KEY25581.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
salx-type abc antimicrobial peptide transport system atpase component
L2_037_240G1_scaffold_661_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5884..6783
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4K9_BIFLO
hypothetical protein
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EEI79760.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_037_240G1_scaffold_661_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6802..7716
DNA (915bp) protein (305aa)
Condensin subunit ScpA n=12 Tax=Bifidobacterium RepID=D6DCV4_BIFLN
hypothetical protein
Chromosome segregation protein ScpA {ECO:0000313|EMBL:KEY25579.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_037_240G1_scaffold_661_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7768..8445
DNA (678bp) protein (226aa)
Segregation and condensation protein ScpB n=15 Tax=Bifidobacterium RepID=V6XX05_BIFLN
hypothetical protein
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_037_240G1_scaffold_661_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8577..9404
DNA (828bp) protein (276aa)
ADP-ribose pyrophosphatase n=5 Tax=Bifidobacterium RepID=F8APK8_BIFLN
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KHD94939.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_037_240G1_scaffold_661_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9464..10744
DNA (1281bp) protein (427aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Quinolinate synthase A n=15 Tax=Bifidobacterium RepID=E4R2A4_BIFLM
quinolinate synthase
L2_037_240G1_scaffold_661_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10836..12467
DNA (1632bp) protein (544aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L-aspartate oxidase n=8 Tax=Bifidobacterium longum RepID=E8MDW8_BIFL2
L-aspartate oxidase
L2_037_240G1_scaffold_661_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12471..13364
DNA (894bp) protein (298aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=11 Tax=Bifidobacterium RepID=B3DQU3_BIFLD
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:KEY25574.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_037_240G1_scaffold_661_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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13367..14614
DNA (1248bp) protein (416aa)
Cysteine sulfinate desulfinase/cysteine desulfurase n=13 Tax=Bifidobacterium RepID=B3DQU4_BIFLD
pyridoxal-phosphate-dependent aminotransferase
Putative pyridoxal-phosphate-dependent aminotransferase {ECO:0000313|EMBL:CCY95676.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_037_240G1_scaffold_661_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14646..15995
DNA (1350bp) protein (450aa)
Sugar transport protein n=15 Tax=Bifidobacterium RepID=F8APL3_BIFLN
sugar transport protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EIJ26957.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_037_240G1_scaffold_661_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16310..18241
DNA (1932bp) protein (644aa)
GTP-binding protein TypA/BipA n=12 Tax=Bifidobacterium RepID=D6DCW1_BIFLN
GTP-binding protein
Widely conserved protein similar to those annotated as GTP-binding elongation factor TypA/BipA {ECO:0000313|EMBL:AAN25180.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_037_240G1_scaffold_661_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18341..18787
DNA (447bp) protein (149aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DQU7_BIFLD
alcohol dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:ACD97693.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_037_240G1_scaffold_661_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18876..19844
DNA (969bp) protein (323aa)
Prephenate dehydratase n=14 Tax=Bifidobacterium RepID=B3DQU8_BIFLD
chorismate mutase
Prephenate dehydratase {ECO:0000313|EMBL:ACD97694.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_037_240G1_scaffold_661_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19838..20836
DNA (999bp) protein (333aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:ESV33772.1}; EC=1.3.1.43 {ECO:0000313|EMBL:ESV33772.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Prephenate dehydrogenase n=1 Tax=Bifidobacterium longum E18 RepID=V6XWZ5_BIFLN
pdhA; pdha
Displaying 19 items

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