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L2_037_240G1_scaffold_865

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_240G1_scaffold_865_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1124)
DNA (1122bp) protein (374aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEQ54561.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEQ54561.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
DNA polymerase III, subunit gamma and tau n=2 Tax=Bifidobacterium longum RepID=C5E9F2_BIFLI
DNA polymerase III gamma and tau subunits
L2_037_240G1_scaffold_865_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1257..1856
DNA (600bp) protein (200aa)
AcrR-type transcriptional regulator n=7 Tax=Bifidobacterium RepID=E4R0U0_BIFLM
transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEI81583.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_037_240G1_scaffold_865_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2054..3184)
DNA (1131bp) protein (377aa)
Diacylglycerol kinase catalytic domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GSQ3_BIFLN
Diacylglycerol kinase catalytic domain protein {ECO:0000313|EMBL:EEI81582.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
sphK1; sphk1
L2_037_240G1_scaffold_865_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3233..3610)
DNA (378bp) protein (126aa)
ABC-type oligopeptide transport system periplasmic component n=2 Tax=Bifidobacterium longum RepID=B3DUB8_BIFLD
oppA3; oligopeptide ABC transporter periplasmic protein
TadE-like protein {ECO:0000313|EMBL:EEI81581.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_037_240G1_scaffold_865_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3660..4037)
DNA (378bp) protein (126aa)
TadE-like protein n=6 Tax=Bifidobacterium RepID=C2GSQ1_BIFLN
hypothetical protein
Pilus assembly protein TadE {ECO:0000313|EMBL:KEY31899.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_037_240G1_scaffold_865_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4043..4330)
DNA (288bp) protein (96aa)
Uncharacterized protein n=16 Tax=Bifidobacterium RepID=Q8G6X5_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43181.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_037_240G1_scaffold_865_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4615..5217)
DNA (603bp) protein (201aa)
Flp pilus assembly protein n=13 Tax=Bifidobacterium longum RepID=B3DUC1_BIFLD
tadC; Flp pilus assembly protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54567.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_037_240G1_scaffold_865_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5214..5870)
DNA (657bp) protein (219aa)
Flp pilus assembly protein n=8 Tax=Bifidobacterium RepID=B3DUC2_BIFLD
hypothetical protein
Flp pilus assembly protein {ECO:0000313|EMBL:AIW44460.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_037_240G1_scaffold_865_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5870..6520)
DNA (651bp) protein (217aa)
CpaF n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R0U7_BIFLM
hypothetical protein
Type II/IV secretion system protein {ECO:0000313|EMBL:EIJ23023.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_037_240G1_scaffold_865_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6641..6874
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAN6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP82790.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_037_240G1_scaffold_865_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6944..7894)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6X1_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:EEQ54569.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L2_037_240G1_scaffold_865_12
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8117..8842)
DNA (726bp) protein (242aa)
Uncharacterized membrane-associated protein n=17 Tax=Bifidobacterium RepID=D6DAN8_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV36366.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_037_240G1_scaffold_865_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8993..9664)
DNA (672bp) protein (224aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=14 Tax=Bifidobacterium RepID=D6DAN9_BIFLN
hypothetical protein
HAD family hydrolase {ECO:0000313|EMBL:KEY23932.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_037_240G1_scaffold_865_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9777..10547)
DNA (771bp) protein (257aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase n=18 Tax=Bifidobacterium RepID=F9Y046_BIFBU
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CCY96166.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_037_240G1_scaffold_865_15
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10634..12112)
DNA (1479bp) protein (493aa)
Acyl-CoA reductase {ECO:0000256|PIRNR:PIRNR009414}; EC=1.2.1.50 {ECO:0000256|PIRNR:PIRNR009414};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Acyl-CoA reductase n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R0V2_BIFLM
luxC; luxc
L2_037_240G1_scaffold_865_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12120..13241)
DNA (1122bp) protein (374aa)
PaaK n=2 Tax=Bifidobacterium RepID=E4R0V3_BIFLM
paaK; paak
Coenzyme F390 synthetase {ECO:0000313|EMBL:KEY31909.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_037_240G1_scaffold_865_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13278..14630)
DNA (1353bp) protein (451aa)
Xanthine/uracil permease n=3 Tax=Bifidobacterium longum RepID=B3DNP5_BIFLD
uraA3; Xanthine/uracil permease
Permease family protein {ECO:0000313|EMBL:EIJ30914.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_037_240G1_scaffold_865_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14903..15490)
DNA (588bp) protein (196aa)
Transcriptional regulator, MerR family n=2 Tax=Bifidobacterium longum RepID=C5E9G7_BIFLI
transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEQ54576.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_037_240G1_scaffold_865_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15505..16524)
DNA (1020bp) protein (340aa)
DnaJ C-terminal domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B3I4_BIFLN
Molecular chaperone DnaJ {ECO:0000313|EMBL:KEY31912.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
molecular chaperone DnaJ
L2_037_240G1_scaffold_865_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16525..17079)
DNA (555bp) protein (185aa)
Protein GrpE n=14 Tax=Bifidobacterium RepID=GRPE_BIFLO
chaperone GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_037_240G1_scaffold_865_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17079..18959)
DNA (1881bp) protein (627aa)
Chaperone protein DnaK n=20 Tax=Bifidobacterium RepID=DNAK_BIFLD
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
chaperone DnaK
L2_037_240G1_scaffold_865_22
unknown

Not on your lists

comp(19318..19575)
DNA (258bp) protein (86aa)

This feature has no annotations

L2_037_240G1_scaffold_865_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19674..19787)
DNA (114bp) protein (38aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DNQ1_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ23044.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_037_240G1_scaffold_865_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19940..22477)
DNA (2538bp) protein (846aa)
Alpha-glucosidase n=2 Tax=Bifidobacterium longum RepID=E4R0W0_BIFLM
Alpha-glucosidase {ECO:0000313|EMBL:BAP82777.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
alpha-glucosidase
L2_037_240G1_scaffold_865_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22589..23308)
DNA (720bp) protein (240aa)
MalG-type ABC sugar transport system permease component n=15 Tax=Bifidobacterium RepID=B3DNQ3_BIFLD
ABC transporter permease
ABC transporter, permease domain protein {ECO:0000313|EMBL:EIJ23059.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_037_240G1_scaffold_865_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23575..24585
DNA (1011bp) protein (337aa)
LacI-type response repressor n=16 Tax=Bifidobacterium RepID=B3DNQ4_BIFLD
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY23944.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
transcriptional regulator
L2_037_240G1_scaffold_865_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24597..25253)
DNA (657bp) protein (219aa)
Secreted alpha-amylase n=4 Tax=Bacteria RepID=S3DPR7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP82774.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_037_240G1_scaffold_865_28
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25298..25579
DNA (282bp) protein (94aa)
Uncharacterized protein n=15 Tax=Bacteria RepID=B3DNQ6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96183.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_037_240G1_scaffold_865_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25840..28077
DNA (2238bp) protein (746aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=5 Tax=Bifidobacterium longum RepID=D6DAQ2_BIFLN
L2_037_240G1_scaffold_865_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28388..29422
DNA (1035bp) protein (345aa)
Transcriptional regulator, LacI family n=10 Tax=Bifidobacterium longum RepID=D6DAQ3_BIFLN
laci-type response repressor
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EIJ23030.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Displaying items 1-30 of 31 in total

View Taxonomy